Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3010 SustainPine v3.0 1413
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12227 SustainPine v3.0 1093
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17402 SustainPine v3.0 1331
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17464 SustainPine v3.0 1222
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ripening-related protein 9.224e-10
Complete
sp_v3.0_unigene20870 SustainPine v3.0 1293
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ripening-related protein 9.393e-10
Complete
sp_v3.0_unigene25211 SustainPine v3.0 809
• AutoFact: PREDICTED: ripening-related protein-like [Vitis vinifera] emb|CAB85628.1| putative ripening-related protein [Vitis vinifera] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic, putative 3.349e-09
N-terminus
sp_v3.0_unigene27935 SustainPine v3.0 1356
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ripening-related protein 9.308e-10
Complete
sp_v3.0_unigene31068 SustainPine v3.0 447
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene31344 SustainPine v3.0 1289
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene32379 SustainPine v3.0 546
• AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9SYB9_RICCO 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic, putative 6.955e-10
N-terminus
sp_v3.0_unigene33252 SustainPine v3.0 632
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ripening-related protein 4.681e-10
C-terminus
sp_v3.0_unigene33406 SustainPine v3.0 746
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic, putative 1.85e-09
Putative C-terminus
sp_v3.0_unigene35482 SustainPine v3.0 685
• AutoFact: Ripening-related protein-like; hydrolase-like n=3 Tax=Arabidopsis RepID=Q9LTI1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic, putative 3.11e-09
N-terminus
sp_v3.0_unigene36683 SustainPine v3.0 456
• AutoFact: Putative ripening-related protein n=1 Tax=Vitis vinifera RepID=Q9M4H5_VITVI 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic/ hydrolase 2.209e-09
N-terminus
sp_v3.0_unigene78716 SustainPine v3.0 140
• AutoFact: Putative ripening-related protein n=1 Tax=Vitis vinifera RepID=Q9M4H5_VITVI 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102636 SustainPine v3.0 1291
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ripening-related protein 9.141e-10
Putative Complete
sp_v3.0_unigene127784 SustainPine v3.0 437
• AutoFact: Putative ripening-related protein n=1 Tax=Vitis vinifera RepID=Q9M4H5_VITVI 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic, putative 1.255e-09
N-terminus
sp_v3.0_unigene128105 SustainPine v3.0 963
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7THM2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene131434 SustainPine v3.0 291
• AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9RN19_RICCO 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic, putative 2.567e-09
Internal
sp_v3.0_unigene133896 SustainPine v3.0 370
• AutoFact: PREDICTED: ripening-related protein-like [Vitis vinifera] emb|CAB85628.1| putative ripening-related protein [Vitis vinifera] 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic, putative 2.597e-10
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain