Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene32174 SustainPine v3.0 610
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.918e-10
Complete
sp_v3.0_unigene133524 SustainPine v3.0 265
• AutoFact: ribosomal protein L25-like protein [Solanum tuberosum] 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.681e-09
C-terminus
sp_v3.0_unigene150646 SustainPine v3.0 387
• AutoFact: [J] COG0089 Ribosomal protein L23 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene151893 SustainPine v3.0 438
• AutoFact: ribosomal protein L25-like protein [Solanum tuberosum] 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.279e-09
C-terminus
sp_v3.0_unigene152946 SustainPine v3.0 147
• AutoFact: 60S ribosomal protein L23a, putative n=2 Tax=Theileria RepID=Q4MZ08_THEPA 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 2.032e-09
C-terminus
sp_v3.0_unigene153377 SustainPine v3.0 407
• AutoFact: Ribosomal protein L23a n=2 Tax=Chlamydomonadales RepID=A8J239_CHLRE 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.642e-10
N-terminus
sp_v3.0_unigene153943 SustainPine v3.0 441
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.412e-10
Putative N-terminus
sp_v3.0_unigene155188 SustainPine v3.0 478
• AutoFact: PREDICTED: similar to ribosomal protein L23a n=1 Tax=Ciona intestinalis RepID=UPI00006A76DE 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
Putative Complete
sp_v3.0_unigene155289 SustainPine v3.0 418
• AutoFact: Ribosomal protein L23a (Fragment) n=1 Tax=Argopecten irradians RepID=Q8ITB8_AEQIR 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene156499 SustainPine v3.0 353
• AutoFact: Ribosomal protein L23a n=2 Tax=Chlamydomonadales RepID=A8J239_CHLRE 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.384e-10
N-terminus
sp_v3.0_unigene156671 SustainPine v3.0 409
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Arenicola marina RepID=A8UFC5_AREMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.642e-10
Putative Complete
sp_v3.0_unigene157294 SustainPine v3.0 295
• AutoFact: PREDICTED: similar to ribosomal protein L23Ae isoform 1 n=1 Tax=Tribolium castaneum RepID=UPI0000D570FC 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene158455 SustainPine v3.0 333
• AutoFact: PREDICTED: similar to ribosomal protein L23a n=1 Tax=Ciona intestinalis RepID=UPI00006A76DE 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene158787 SustainPine v3.0 392
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 1.992e-10
N-terminus
sp_v3.0_unigene159138 SustainPine v3.0 333
• AutoFact: Ribosomal protein L23a n=2 Tax=Chlamydomonadales RepID=A8J239_CHLRE 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
Putative C-terminus
sp_v3.0_unigene160139 SustainPine v3.0 459
• AutoFact: Probable RPL25-ribosomal protein L23a.e n=2 Tax=Ustilaginaceae RepID=E6ZVX9_9BASI 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.412e-10
Complete
sp_v3.0_unigene183225 SustainPine v3.0 688
• AutoFact: 60S ribosomal protein L23a n=8 Tax=Zea mays RepID=B6UHJ9_MAIZE 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
Putative Complete
sp_v3.0_unigene188485 SustainPine v3.0 449
• AutoFact: 60S ribosomal protein L23a n=2 Tax=Zea mays RepID=B6TN30_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene189946 SustainPine v3.0 154
• AutoFact: PREDICTED: similar to ribosomal protein L23a [Strongylocentrotus purpuratus] ref|XP_792948.2| PREDICTED: similar to ribosomal protein L23a [Strongylocentrotus purpuratus] 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 2.351e-09
C-terminus
sp_v3.0_unigene202801 SustainPine v3.0 531
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.922e-09
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain