Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene24673 SustainPine v3.0 347
• AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 7.0e-21
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene25962 SustainPine v3.0 549
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Polytomella sp. Pringsheim 198.80 RepID=Q84VS7_9CHLO 6.0e-38
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene26274 SustainPine v3.0 728
• AutoFact: 60S ribosomal protein L13 (Fragment) n=1 Tax=Chironomus thummi RepID=A2IA72_9DIPT 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene33156 SustainPine v3.0 426
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Glycine max RepID=C6SYZ4_SOYBN 9.0e-21
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene76346 SustainPine v3.0 339
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CPG6_LACBS 4.99983e-42
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene120157 SustainPine v3.0 273
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CPG6_LACBS 6.0e-30
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene144877 SustainPine v3.0 423
• AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 2.8026e-45
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene151688 SustainPine v3.0 271
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Glycine max RepID=C6SYD1_SOYBN 4.0e-20
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Internal
sp_v3.0_unigene155359 SustainPine v3.0 414
• AutoFact: 60S ribosomal protein L13 [Schizosaccharomyces pombe 972h-] sp|O74175.1|RL13_SCHPO RecName: Full=60S ribosomal protein L13 dbj|BAA31740.1| ribosomal protein L13 homolog [Schizosaccharomyces pombe] emb|CAB65806.1| 60S ribosomal protein L13 [Schizosaccharom 4.0e-37
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Putative N-terminus
sp_v3.0_unigene157117 SustainPine v3.0 401
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QA08_MALGO 2.0e-35
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene157394 SustainPine v3.0 198
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Polytomella sp. Pringsheim 198.80 RepID=Q84VS7_9CHLO 1.0e-10
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 3.903e-08
N-terminus
sp_v3.0_unigene157487 SustainPine v3.0 518
• AutoFact: 60S ribosomal protein L13 n=3 Tax=Onchocercidae RepID=A8QB05_BRUMA 5.60519e-45
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene157912 SustainPine v3.0 357
• AutoFact: Probable ribosomal protein L13B n=2 Tax=Ustilaginaceae RepID=E7A1G2_9BASI 1.0e-36
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene158657 SustainPine v3.0 164
• AutoFact: 60S ribosomal protein L13 (Fragment) n=1 Tax=Protopterus dolloi RepID=Q6EE90_PRODO 2.0e-11
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
Internal
sp_v3.0_unigene159326 SustainPine v3.0 143
• AutoFact: PREDICTED: similar to ribosomal protein L13 isoform 2 [Nasonia vitripennis] ref|XP_001607329.1| PREDICTED: similar to ribosomal protein L13 isoform 1 [Nasonia vitripennis] 1.0e-06
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
N-terminus
sp_v3.0_unigene161674 SustainPine v3.0 391
• AutoFact: 60S ribosomal protein L13 n=13 Tax=Poaceae RepID=Q7XJB4_ORYSJ 2.0e-32
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene167390 SustainPine v3.0 369
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Spadella cephaloptera RepID=A8E676_9BILA 1.0e-30
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene183108 SustainPine v3.0 696
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Spadella cephaloptera RepID=A8E676_9BILA 6.02558e-44
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene186420 SustainPine v3.0 704
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Lineus viridis RepID=B0Z9L7_9BILA 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene192853 SustainPine v3.0 424
• AutoFact: 60S ribosomal protein L13 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0VZJ7_9STRA 3.0e-40
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain