Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: histone H3 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1183 SustainPine v3.0 1207
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene17155 SustainPine v3.0 1033
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene18230 SustainPine v3.0 761
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene21079 SustainPine v3.0 928
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene31464 SustainPine v3.0 456
• AutoFact: Histone H3.3 n=3 Tax=Tetrahymena RepID=H33_TETPY 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene34651 SustainPine v3.0 1006
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene35527 SustainPine v3.0 830
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 4.97099e-40
Complete
sp_v3.0_unigene42279 SustainPine v3.0 802
• AutoFact: Histone H3 n=1 Tax=Oryza sativa Indica Group RepID=A2Y8W0_ORYSI 5.0e-27
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene56642 SustainPine v3.0 209
• AutoFact: PREDICTED: histone H3.3B-like n=1 Tax=Rattus norvegicus RepID=UPI00002519F5 5.0e-13
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 7.897e-15
Internal
sp_v3.0_unigene57912 SustainPine v3.0 281
• AutoFact: histone H3 [Arabidopsis thaliana] gb|AEE87156.1| histone H3 [Arabidopsis thaliana] 3.0e-20
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
N-terminus
sp_v3.0_unigene58256 SustainPine v3.0 385
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 4.0e-39
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 6.84e-23
Putative N-terminus
sp_v3.0_unigene74502 SustainPine v3.0 315
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=D7KSR1_ARALL 3.0e-15
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 3.84e-23
Putative N-terminus
sp_v3.0_unigene127221 SustainPine v3.0 1040
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene128753 SustainPine v3.0 494
• AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TNQ7_PHYPA 9.0e-31
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene144806 SustainPine v3.0 720
• AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene145045 SustainPine v3.0 528
• AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TNQ7_PHYPA 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Putative Complete
sp_v3.0_unigene151962 SustainPine v3.0 515
• AutoFact: PREDICTED: histone cluster 2, H3c2-like n=1 Tax=Rattus norvegicus RepID=UPI0001CF3AD8 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene152752 SustainPine v3.0 432
• AutoFact: PREDICTED: similar to histone 1, H2ai (predicted) isoform 1 n=2 Tax=Eutheria RepID=UPI00005A57CD 0.0
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene154180 SustainPine v3.0 366
• AutoFact: Histone H3 (Fragment) n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7Z9Z6_NECH7 3.0e-18
• FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H3 1.333e-18
N-terminus
sp_v3.0_unigene156086 SustainPine v3.0 363
• AutoFact: Histone H3 n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1ML80_MICPC 3.0e-20
• FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H3 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain