Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17355 SustainPine v3.0 1331
• AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 0.0
Complete
sp_v3.0_unigene29452 SustainPine v3.0 1385
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene31038 SustainPine v3.0 664
• AutoFact: Eukaryotic translation initiation factor 5A n=2 Tax=Caligus RepID=C1BMM4_9MAXI 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 3.437e-28
Complete
sp_v3.0_unigene31945 SustainPine v3.0 609
• AutoFact: Translation initiation factor 5A n=1 Tax=Glossina morsitans morsitans RepID=D3TMH0_GLOMM 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 2.844e-28
Complete
sp_v3.0_unigene33231 SustainPine v3.0 587
• AutoFact: Eukaryotic translation initiation factor 5A n=8 Tax=Saccharomycetales RepID=IF5A_CANAL 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 4.641e-28
Complete
sp_v3.0_unigene55702 SustainPine v3.0 345
• AutoFact: Eukaryotic translation initiation factor 5A-2 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NJF7_COPC7 6.02558e-44
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.811e-28
N-terminus
sp_v3.0_unigene60870 SustainPine v3.0 155
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 6.0e-13
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: eIF-4D 5.059e-14
Internal
sp_v3.0_unigene65463 SustainPine v3.0 352
• AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 1.4013e-45
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 3.678e-28
Internal
sp_v3.0_unigene74967 SustainPine v3.0 168
• AutoFact: eukaryotic translation initiation factor 5A [Picea abies] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 3.636e-17
Internal
sp_v3.0_unigene75797 SustainPine v3.0 409
• AutoFact: Eukaryotic translation initiation factor 5A-1 n=47 Tax=Magnoliophyta RepID=IF5A1_MEDSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor eIF5A 0.0
Putative N-terminus
sp_v3.0_unigene126834 SustainPine v3.0 1274
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Misassembled
sp_v3.0_unigene143172 SustainPine v3.0 825
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.397e-28
Putative Complete
sp_v3.0_unigene144226 SustainPine v3.0 733
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.199e-28
Complete
sp_v3.0_unigene144723 SustainPine v3.0 525
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 3.0e-31
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Translation initiation factor 5A 3.478e-16
Complete
sp_v3.0_unigene144736 SustainPine v3.0 210
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A-1 1.178e-14
Putative C-terminus
sp_v3.0_unigene154349 SustainPine v3.0 327
• AutoFact: Eukaryotic translation initiation factor 5A-1 n=20 Tax=Saccharomycetaceae RepID=IF5A1_YEAST 4.0e-21
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 2 8.982e-10
C-terminus
sp_v3.0_unigene154949 SustainPine v3.0 425
• AutoFact: Eukaryotic translation initiation factor eIF-5A n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D4L5_NEOFI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.811e-28
N-terminus
sp_v3.0_unigene155069 SustainPine v3.0 145
• AutoFact: Eukaryotic translation initiation factor eIF-5A n=4 Tax=Trichocomaceae RepID=B6QKQ7_PENMQ 3.0e-10
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Internal
sp_v3.0_unigene155786 SustainPine v3.0 296
• AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 1.0e-10
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene158595 SustainPine v3.0 427
• AutoFact: Eukaryotic translation initiation factor 5A-1 n=3 Tax=Onygenales RepID=C4JVG1_UNCRE 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.601e-28
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain