Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5572 SustainPine v3.0 1705
AutoFact: [R] COG0666 FOG: Ankyrin repeat 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative RING zinc finger ankyrin protein 2.807e-08
Complete
sp_v3.0_unigene5619 SustainPine v3.0 2352
AutoFact: putative E3 ubiquitin-protein ligase XBAT31 [Arabidopsis thaliana] sp|Q94B55.1|XB31_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase XBAT31; AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBAT31; AltName: Full=Protein XB3 h 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative RING zinc finger ankyrin protein 3.655e-08
Complete
sp_v3.0_unigene100363 SustainPine v3.0 470
AutoFact: putative E3 ubiquitin-protein ligase XBAT31 [Arabidopsis thaliana] sp|Q94B55.1|XB31_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase XBAT31; AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBAT31; AltName: Full=Protein XB3 h 3.0e-16
FL-Next: sp=Putative E3 ubiquitin-protein ligase XBAT31; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene129608 SustainPine v3.0 414
AutoFact: Unassigned protein
FL-Next: sp=E3 ubiquitin-protein ligase XB3; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene165175 SustainPine v3.0 240
AutoFact: putative E3 ubiquitin-protein ligase XBAT31 [Arabidopsis thaliana] sp|Q94B55.1|XB31_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase XBAT31; AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBAT31; AltName: Full=Protein XB3 h 5.0e-22
FL-Next: sp=E3 ubiquitin-protein ligase XB3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Ring zinc finger protein 2.813e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain