Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene23869 SustainPine v3.0 866
• AutoFact: Ribosomal protein S4 (Fragment) n=1 Tax=Lepidochitona cinerea RepID=E3P7G6_9MOLL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
Putative Complete
sp_v3.0_unigene23938 SustainPine v3.0 514
• AutoFact: Ribosomal protein S4e n=1 Tax=Lygus lineolaris RepID=A5HMP6_LYGLI 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.176e-20
C-terminus
sp_v3.0_unigene24559 SustainPine v3.0 916
• AutoFact: Ribosomal protein S4 (Fragment) n=1 Tax=Lepidochitona cinerea RepID=E3P7G6_9MOLL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
Complete
sp_v3.0_unigene25954 SustainPine v3.0 498
• AutoFact: ribosomal protein S4 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.25e-24
C-terminus
sp_v3.0_unigene76513 SustainPine v3.0 279
• AutoFact: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_15 n=1 Tax=Blastocystis hominis RepID=D8M187_BLAHO 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.131e-20
Putative C-terminus
sp_v3.0_unigene80028 SustainPine v3.0 352
• AutoFact: 40S ribosomal protein S4, putative n=1 Tax=Pediculus humanus corporis RepID=E0W344_PEDHC 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
Internal
sp_v3.0_unigene150415 SustainPine v3.0 341
• AutoFact: 40S ribosomal protein S4 n=2 Tax=Euteleostei RepID=C0H7L0_SALSA 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.131e-20
C-terminus
sp_v3.0_unigene150475 SustainPine v3.0 362
• AutoFact: Ribosomal protein s4a n=1 Tax=Ancylostoma caninum RepID=A4ZVZ6_ANCCA 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.916e-20
C-terminus
sp_v3.0_unigene151886 SustainPine v3.0 504
• AutoFact: 40S ribosomal protein S4, putative n=1 Tax=Brugia malayi RepID=A8NNZ4_BRUMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.176e-20
C-terminus
sp_v3.0_unigene152857 SustainPine v3.0 257
• AutoFact: Ribosomal protein S4 (Fragment) n=1 Tax=Myxine glutinosa RepID=Q86LW7_MYXGL 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 7.321e-17
Internal
sp_v3.0_unigene154371 SustainPine v3.0 439
• AutoFact: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_15 n=1 Tax=Blastocystis hominis RepID=D8M187_BLAHO 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.796e-20
C-terminus
sp_v3.0_unigene155084 SustainPine v3.0 226
• AutoFact: 40S ribosomal protein S4, putative n=1 Tax=Pediculus humanus corporis RepID=E0W344_PEDHC 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.646e-20
Internal
sp_v3.0_unigene157586 SustainPine v3.0 182
• AutoFact: 40S ribosomal protein S4 n=2 Tax=Ixodoidea RepID=RS4_IXOSC 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157869 SustainPine v3.0 476
• AutoFact: Ribosomal protein S4 (Fragment) n=1 Tax=Argopecten irradians RepID=Q8ITB7_AEQIR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
C-terminus
sp_v3.0_unigene158097 SustainPine v3.0 394
• AutoFact: ribosomal protein S4 [Myxine glutinosa] 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.043e-20
C-terminus
sp_v3.0_unigene158132 SustainPine v3.0 162
• AutoFact: 40S ribosomal protein S4, putative n=3 Tax=Sarcocystidae RepID=B9PXE4_TOXGO 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene158678 SustainPine v3.0 264
• AutoFact: 40S ribosomal protein S4 n=3 Tax=core eudicotyledons RepID=RS4_SOLTU 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene185965 SustainPine v3.0 520
• AutoFact: Putative ribosomal protein S4 (Fragment) n=1 Tax=Barentsia elongata RepID=A8UAC7_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
C-terminus
sp_v3.0_unigene189843 SustainPine v3.0 685
• AutoFact: 40S ribosomal protein S4 n=4 Tax=Obtectomera RepID=RS4_BOMMO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.456e-24
C-terminus
sp_v3.0_unigene205509 SustainPine v3.0 406
• AutoFact: 40S ribosomal protein S4 [Bombyx mori] sp|Q5UAP0.1|RS4_BOMMO RecName: Full=40S ribosomal protein S4 gb|AAV34860.1| ribosomal protein S4 [Bombyx mori] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain