Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3112 SustainPine v3.0 4515
• AutoFact: E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] ref|NP_001189915.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] sp|Q8RWB8.1|UPL6_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL6; Short=Ubiquitin-protein ligase 6 gb|AAM13201.1| unkn 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene8014 SustainPine v3.0 1646
• AutoFact: E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] ref|NP_001189915.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] sp|Q8RWB8.1|UPL6_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL6; Short=Ubiquitin-protein ligase 6 gb|AAM13201.1| unkn 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene66709 SustainPine v3.0 211
• AutoFact: E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] ref|NP_001189915.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] sp|Q8RWB8.1|UPL6_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL6; Short=Ubiquitin-protein ligase 6 gb|AAM13201.1| unkn 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene123337 SustainPine v3.0 176
• AutoFact: E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] ref|NP_001189915.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] sp|Q8RWB8.1|UPL6_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL6; Short=Ubiquitin-protein ligase 6 gb|AAM13201.1| unkn 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164159 SustainPine v3.0 290
• AutoFact: E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] ref|NP_001189915.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] sp|Q8RWB8.1|UPL6_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL6; Short=Ubiquitin-protein ligase 6 gb|AAM13201.1| unkn 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain