Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene30749 SustainPine v3.0 573
AutoFact: 60S ribosomal protein L27a n=4 Tax=Ascaris suum RepID=F1LEX6_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.383e-16
Complete
sp_v3.0_unigene30924 SustainPine v3.0 543
AutoFact: 60S ribosomal protein L27a n=4 Tax=Ascaris suum RepID=F1LEX6_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 9.278e-16
Complete
sp_v3.0_unigene31400 SustainPine v3.0 551
AutoFact: PREDICTED: similar to 60S ribosomal protein L27a n=1 Tax=Hydra magnipapillata RepID=UPI0001923E6C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.427e-12
Complete
sp_v3.0_unigene32711 SustainPine v3.0 531
AutoFact: 60S ribosomal protein L27a n=4 Tax=Ascaris suum RepID=F1LEX6_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.427e-12
Complete
sp_v3.0_unigene151223 SustainPine v3.0 416
AutoFact: 60S ribosomal protein l27a n=2 Tax=Ictalurus punctatus RepID=E3TEN4_ICTPU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.445e-12
Putative Complete
sp_v3.0_unigene152132 SustainPine v3.0 429
AutoFact: Ribosomal protein L27 n=2 Tax=Phytophthora infestans RepID=D0N851_PHYIT 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.099e-16
C-terminus
sp_v3.0_unigene152709 SustainPine v3.0 270
AutoFact: Ribosomal protein rpl27a (Fragment) n=1 Tax=Arenicola marina RepID=A8UFF6_AREMA 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 3.108e-12
Putative C-terminus
sp_v3.0_unigene152845 SustainPine v3.0 436
AutoFact: Large subunit ribosomal protein 27a (Fragment) n=1 Tax=Koerneria sp. RS1982 RepID=A6YMM2_9BILA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.445e-12
C-terminus
sp_v3.0_unigene153276 SustainPine v3.0 231
AutoFact: PREDICTED: similar to 60S ribosomal protein L27A-related [Strongylocentrotus purpuratus] ref|XP_001194926.1| PREDICTED: similar to 60S ribosomal protein L27A-related [Strongylocentrotus purpuratus] 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 6.977e-12
Internal
sp_v3.0_unigene160763 SustainPine v3.0 458
AutoFact: Ribosomal protein L22 (Fragment) n=1 Tax=Argopecten irradians RepID=Q8ITC4_AEQIR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.427e-12
Putative Complete
sp_v3.0_unigene182996 SustainPine v3.0 642
AutoFact: Ribosomal protein L22 (Fragment) n=1 Tax=Argopecten irradians RepID=Q8ITC4_AEQIR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 60S ribosomal protein L27a 5.203e-12
Complete
sp_v3.0_unigene189099 SustainPine v3.0 627
AutoFact: Ribosomal protein L22 (Fragment) n=1 Tax=Argopecten irradians RepID=Q8ITC4_AEQIR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.099e-16
Complete
sp_v3.0_unigene190223 SustainPine v3.0 450
AutoFact: 60S ribosomal protein L27a n=3 Tax=sordariomyceta RepID=A6S7S5_BOTFB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27a-2 4.665e-12
C-terminus
sp_v3.0_unigene203248 SustainPine v3.0 544
AutoFact: PREDICTED: similar to 60S ribosomal protein L27a n=1 Tax=Hydra magnipapillata RepID=UPI0001923E6C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 9.278e-16
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain