Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene48756 SustainPine v3.0 309
• AutoFact: Putative rubisco activase n=1 Tax=Oryza sativa Japonica Group RepID=Q8RU45_ORYSJ 7.0e-28
• FL-Next: tr=F3N23.32 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene50177 SustainPine v3.0 674
• AutoFact: putative rubisco activase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rubisco activase 8.572e-24
Internal
sp_v3.0_unigene75706 SustainPine v3.0 145
• AutoFact: Highly similar to ribulose-1,5-bisphosphate carboxylase/oxygenase activase n=1 Tax=Arabidopsis thaliana RepID=Q9SSL6_ARATH 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene97261 SustainPine v3.0 489
• AutoFact: putative rubisco activase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rubisco activase 8.572e-24
Internal
sp_v3.0_unigene106510 SustainPine v3.0 320
• AutoFact: putative Rubisco activase 2 [Arabidopsis thaliana] gb|AAK32846.1|AF361834_1 At1g73110/F3N23_39 [Arabidopsis thaliana] gb|AAL77745.1| At1g73110/F3N23_39 [Arabidopsis thaliana] dbj|BAC43522.1| unknown protein [Arabidopsis thaliana] gb|AEE35415.1| putative R 5.04467e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene106674 SustainPine v3.0 457
• AutoFact: Putative RuBisCo activase protein (Fragment) n=1 Tax=Zantedeschia hybrid cultivar RepID=Q6J4N8_9ARAE 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene148526 SustainPine v3.0 238
• AutoFact: putative rubisco activase [Oryza sativa Japonica Group] 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rubisco activase 1.233e-27
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain