Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: glutamate-gated kainate-type ion channel receptor subunit GluR5, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16321 SustainPine v3.0 697
AutoFact: RecName: Full=Glutamate receptor 3.1; AltName: Full=Ligand-gated ion channel 3.1; Flags: Precursor emb|CAE03759.1| OSJNBa0013K16.8 [Oryza sativa Japonica Group] gb|ABC33859.1| putative glutamate receptor-like channel 3.1 [Oryza sativa Japonica Group] gb|E 0.0
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 6.915e-19
Internal
sp_v3.0_unigene29380 SustainPine v3.0 517
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 5.0e-12
FL-Next: sp=Glutamate receptor 3.7; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene42862 SustainPine v3.0 856
AutoFact: glutamate receptor 3.3 [Arabidopsis thaliana] sp|Q9C8E7.1|GLR33_ARATH RecName: Full=Glutamate receptor 3.3; AltName: Full=Ligand-gated ion channel 3.3; Flags: Precursor gb|AAG51316.1|AC025815_3 ligand-gated ion channel, putative [Arabidopsis thaliana] gb| 1.00053e-42
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 7.324e-22
C-terminus
sp_v3.0_unigene50788 SustainPine v3.0 177
AutoFact: Glutamate receptor n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8F0_PHYPA 1.0e-19
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.166e-19
Internal
sp_v3.0_unigene64431 SustainPine v3.0 255
AutoFact: Glutamate receptor n=1 Tax=Ricinus communis RepID=B9SDW0_RICCO 2.0e-12
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene68744 SustainPine v3.0 241
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 2.0e-09
FL-Next: sp=Glutamate receptor 3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene77700 SustainPine v3.0 334
AutoFact: Glutamate receptor 3.3 n=3 Tax=Arabidopsis RepID=GLR33_ARATH 5.0e-23
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene79091 SustainPine v3.0 152
AutoFact: RecName: Full=Glutamate receptor 2.5; AltName: Full=Ligand-gated ion channel 2.5; Flags: Precursor 2.0e-08
FL-Next: sp=Glutamate receptor 2.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene94167 SustainPine v3.0 690
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 0.0
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 9.07201e-42
Internal
sp_v3.0_unigene96982 SustainPine v3.0 361
AutoFact: glutamate receptor, ionotropic kainate 5 precursor-like protein [Oryza sativa Japonica Group] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamate receptor 3 plant, putative 2.045e-07
Putative N-terminus
sp_v3.0_unigene106734 SustainPine v3.0 238
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 2.0e-09
FL-Next: sp=Glutamate receptor 3.7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate receptor 3 plant, putative 6.391e-17
Internal
sp_v3.0_unigene108715 SustainPine v3.0 868
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 3.0e-33
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Glutamate receptor 3 plant, putative 1.75e-17
N-terminus
sp_v3.0_unigene108732 SustainPine v3.0 322
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 2.0e-31
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.386e-16
Internal
sp_v3.0_unigene117178 SustainPine v3.0 251
AutoFact: glutamate receptor 3.3 [Arabidopsis thaliana] sp|Q9C8E7.1|GLR33_ARATH RecName: Full=Glutamate receptor 3.3; AltName: Full=Ligand-gated ion channel 3.3; Flags: Precursor gb|AAG51316.1|AC025815_3 ligand-gated ion channel, putative [Arabidopsis thaliana] gb| 2.0e-13
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene168013 SustainPine v3.0 206
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 4.0e-21
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.042e-16
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain