Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3936 SustainPine v3.0 1413
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NK23_PICSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17082 SustainPine v3.0 1268
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NK23_PICSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene26244 SustainPine v3.0 414
• AutoFact: Proteasome subunit alpha type (Fragment) n=1 Tax=Vitis vinifera RepID=D7TZK1_VITVI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 8.673e-33
N-terminus
sp_v3.0_unigene73470 SustainPine v3.0 222
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NK23_PICSI 1.0e-10
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.189e-10
Misassembled
sp_v3.0_unigene142176 SustainPine v3.0 298
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NK23_PICSI 2.0e-18
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.902e-08
Internal
sp_v3.0_unigene156431 SustainPine v3.0 455
• AutoFact: PREDICTED: similar to proteasome alpha 5 subunit n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000583F3C 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.663e-40
N-terminus
sp_v3.0_unigene158200 SustainPine v3.0 381
• AutoFact: Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus RepID=D7G614_ECTSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.719e-37
N-terminus
sp_v3.0_unigene158442 SustainPine v3.0 403
• AutoFact: Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus RepID=D7G614_ECTSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.271e-35
N-terminus
sp_v3.0_unigene158886 SustainPine v3.0 267
• AutoFact: proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260] gb|EDK39981.1| proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260] 2.0e-15
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha 9.26e-06
C-terminus
sp_v3.0_unigene192627 SustainPine v3.0 430
• AutoFact: Proteasome subunit alpha type 5 n=1 Tax=Naegleria gruberi RepID=D2UXR2_NAEGR 4.06377e-44
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 4.301e-18
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain