Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7289 SustainPine v3.0 1442
AutoFact: Potassium channel TORK1 n=1 Tax=Nicotiana tabacum RepID=Q5NT78_TOBAC 3.0e-32
FL-Next: sp=Potassium channel KOR1; Oryza sativa subsp. japonica (Rice). 0.0
Misassembled
sp_v3.0_unigene9407 SustainPine v3.0 1602
AutoFact: potassium channel TORK1 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel SKOR, putative 2.032e-08
C-terminus
sp_v3.0_unigene29299 SustainPine v3.0 743
AutoFact: Shaker-like potassium channel n=4 Tax=Vitis vinifera RepID=Q84LA0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene39395 SustainPine v3.0 567
AutoFact: Potassium channel KOR1 n=3 Tax=Oryza sativa RepID=KOR1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene42617 SustainPine v3.0 625
AutoFact: potassium channel TORK1 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel SKOR, putative 2.202e-08
Putative N-terminus
sp_v3.0_unigene54271 SustainPine v3.0 317
AutoFact: RecName: Full=Potassium channel KOR1; AltName: Full=K(+) outward-rectifying channel 1 dbj|BAD45736.1| putative shaker-like potassium channel [Oryza sativa Japonica Group] dbj|BAD45977.1| putative shaker-like potassium channel [Oryza sativa Japonica Group] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel SKOR, putative 2.159e-08
Internal
sp_v3.0_unigene60892 SustainPine v3.0 245
AutoFact: Potassium channel SKOR n=2 Tax=Arabidopsis thaliana RepID=SKOR_ARATH 2.0e-18
FL-Next: sp=Potassium channel SKOR; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene71389 SustainPine v3.0 354
AutoFact: Potassium channel KOR1 n=3 Tax=Oryza sativa RepID=KOR1_ORYSJ 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76508 SustainPine v3.0 214
AutoFact: Potassium channel TORK1 n=1 Tax=Nicotiana tabacum RepID=Q5NT78_TOBAC 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159582 SustainPine v3.0 318
AutoFact: potassium channel TORK1 [Nicotiana tabacum] 1.0e-33
FL-Next: sp=Potassium channel SKOR; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Potassium channel SKOR, putative 2.202e-08
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain