Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene12900 SustainPine v3.0 751
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q3E6P4.1|FB95_ARATH RecName: Full=F-box protein At2g02240 gb|AEC05560.1| F-box protein [Arabidopsis thaliana] 8.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_261, whole genome shotgun sequence 7.889e-15
N-terminus
sp_v3.0_unigene28135 SustainPine v3.0 496
• AutoFact: F-box protein PP2-B7 [Arabidopsis thaliana] sp|Q9ZVQ9.1|PP2B7_ARATH RecName: Full=F-box protein PP2-B7; AltName: Full=Protein PHLOEM PROTEIN 2-LIKE B7; Short=AtPP2-B7 gb|AAC78515.1| hypothetical protein [Arabidopsis thaliana] gb|AAT69218.1| hypothetical p 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene37549 SustainPine v3.0 421
• AutoFact: F-box protein PP2-B7 [Arabidopsis thaliana] sp|Q9ZVQ9.1|PP2B7_ARATH RecName: Full=F-box protein PP2-B7; AltName: Full=Protein PHLOEM PROTEIN 2-LIKE B7; Short=AtPP2-B7 gb|AAC78515.1| hypothetical protein [Arabidopsis thaliana] gb|AAT69218.1| hypothetical p 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene66259 SustainPine v3.0 398
• AutoFact: phloem-specific lectin PP2-like protein [Arabidopsis thaliana] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 1.716e-08
N-terminus
sp_v3.0_unigene72567 SustainPine v3.0 199
• AutoFact: putative phloem-specific lectin [Arabidopsis thaliana] 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene140476 SustainPine v3.0 651
• AutoFact: putative F-box protein PP2-B8 [Arabidopsis thaliana] sp|Q9ZVQ8.1|PP2B8_ARATH RecName: Full=Putative F-box protein PP2-B8; AltName: Full=Protein PHLOEM PROTEIN 2-LIKE B8; Short=AtPP2-B8 gb|AAC78516.1| putative phloem-specific lectin [Arabidopsis thaliana] 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene142423 SustainPine v3.0 560
• AutoFact: pfam12937, F-box-like, F-box-like 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_261, whole genome shotgun sequence 3.873e-19
N-terminus
sp_v3.0_unigene144122 SustainPine v3.0 755
• AutoFact: putative F-box protein PP2-B8 [Arabidopsis thaliana] sp|Q9ZVQ8.1|PP2B8_ARATH RecName: Full=Putative F-box protein PP2-B8; AltName: Full=Protein PHLOEM PROTEIN 2-LIKE B8; Short=AtPP2-B8 gb|AAC78516.1| putative phloem-specific lectin [Arabidopsis thaliana] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene149898 SustainPine v3.0 366
• AutoFact: phloem-specific lectin PP2-like protein [Arabidopsis thaliana] 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 5.383e-08
N-terminus
sp_v3.0_unigene166508 SustainPine v3.0 226
• AutoFact: phloem-specific lectin PP2-like protein [Arabidopsis thaliana] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene203243 SustainPine v3.0 341
• AutoFact: F-box protein PP2-B11 [Arabidopsis thaliana] sp|Q949S5.1|P2B11_ARATH RecName: Full=F-box protein PP2-B11; AltName: Full=Protein PHLOEM PROTEIN 2-LIKE B11; Short=AtPP2-B11; AltName: Full=SKP1-interacting partner 12 gb|AAK93595.1| unknown protein [Arabidops 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SKP1-interacting partner 12 7.31e-06
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain