Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene35022 SustainPine v3.0 1629
• AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene59018 SustainPine v3.0 204
• AutoFact: 40S ribosomal protein n=4 Tax=Oryza sativa RepID=Q10QU9_ORYSJ 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.019e-28
Internal
sp_v3.0_unigene81785 SustainPine v3.0 404
• AutoFact: 40S ribosomal protein S0 n=1 Tax=Laccaria bicolor S238N-H82 RepID=RSSA_LACBS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 3.902e-36
Internal
sp_v3.0_unigene140480 SustainPine v3.0 690
• AutoFact: Putative 40S Ribosomal protein [Oryza sativa Japonica Group] gb|ABF94325.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa Japonica Group] gb|EAZ25828.1| hypothetical protein OsJ_09668 [Oryza sativa Japonica Group] gb|ACJ54906.1| 40S ribosoma 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 8.518e-25
Misassembled
sp_v3.0_unigene140591 SustainPine v3.0 850
• AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.883e-36
C-terminus
sp_v3.0_unigene158915 SustainPine v3.0 367
• AutoFact: 40S ribosomal protein SA n=1 Tax=Nematostella vectensis RepID=RSSA_NEMVE 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.064e-32
N-terminus
sp_v3.0_unigene192615 SustainPine v3.0 533
• AutoFact: ribosomal protein SA [Antheraea yamamai] 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene193128 SustainPine v3.0 410
• AutoFact: 40S ribosomal protein SA n=1 Tax=Pinctada fucata RepID=RSSA_PINFU 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain