Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1351 SustainPine v3.0 1043
• AutoFact: 60S ribosomal protein L27 n=2 Tax=Picea sitchensis RepID=A9NQ84_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene21841 SustainPine v3.0 477
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Lineus viridis RepID=B0Z9M8_9BILA 0.0
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative Complete
sp_v3.0_unigene26384 SustainPine v3.0 420
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 1.96182e-44
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative Complete
sp_v3.0_unigene31503 SustainPine v3.0 525
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZQ7_PHYIT 3.0e-38
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene35901 SustainPine v3.0 513
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 2.0e-40
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene77309 SustainPine v3.0 204
• AutoFact: 60S ribosomal protein L27 n=2 Tax=Picea sitchensis RepID=A9NQ84_PICSI 3.0e-23
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative C-terminus
sp_v3.0_unigene79720 SustainPine v3.0 221
• AutoFact: 60S ribosomal protein L27-B n=4 Tax=Pleosporineae RepID=B2VT56_PYRTR 2.0e-27
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 5.477e-21
Putative N-terminus
sp_v3.0_unigene150652 SustainPine v3.0 274
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Selaginella moellendorffii RepID=D8QZM0_SELML 6.0e-23
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
C-terminus
sp_v3.0_unigene151213 SustainPine v3.0 501
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 0.0
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene152131 SustainPine v3.0 459
• AutoFact: 60S ribosomal protein L27 n=4 Tax=Physcomitrella patens subsp. patens RepID=A9SIT7_PHYPA 2.0e-38
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative Complete
sp_v3.0_unigene152181 SustainPine v3.0 462
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 1.0e-39
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene152473 SustainPine v3.0 498
• AutoFact: Ribosomal protein L27, component of cytosolic 80S ribosome and 60S large subunit [Ostreococcus lucimarinus CCE9901] gb|ABO95935.1| Ribosomal protein L27, component of cytosolic 80S ribosome and 60S large subunit [Ostreococcus lucimarinus CCE9901] 5.0e-37
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene152612 SustainPine v3.0 414
• AutoFact: 60S ribosomal protein L27 n=2 Tax=Araneae RepID=B5M6E5_HAPSC 0.0
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative Complete
sp_v3.0_unigene154008 SustainPine v3.0 474
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 3.0e-40
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene154348 SustainPine v3.0 500
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZQ7_PHYIT 1.0e-27
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 7.171e-28
Putative Complete
sp_v3.0_unigene156002 SustainPine v3.0 346
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Volvox carteri f. nagariensis RepID=D8TTF8_VOLCA 2.0e-31
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
N-terminus
sp_v3.0_unigene206040 SustainPine v3.0 450
• AutoFact: 60S ribosomal protein L27-B n=4 Tax=Pleosporineae RepID=B2VT56_PYRTR 2.0e-30
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 2.967e-08
C-terminus
sp_v3.0_unigene209328 SustainPine v3.0 460
• AutoFact: PREDICTED: ribosomal protein L27-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB9F57 0.0
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain