Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene52038 SustainPine v3.0 342
AutoFact: pentatricopeptide repeat protein-like [Oryza sativa Japonica Group] 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene54942 SustainPine v3.0 259
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100 dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana] gb|AED95337.1| pentatricopept 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64442 SustainPine v3.0 216
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S789_RICCO 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80037 SustainPine v3.0 230
AutoFact: pfam12854, PPR_1, PPR repeat 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene105134 SustainPine v3.0 386
AutoFact: Pentatricopeptide repeat [Medicago truncatula] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene123745 SustainPine v3.0 205
AutoFact: Pentatricopeptide repeat [Medicago truncatula] 1.0e-12
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g46100; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain