Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rna-dependent RNA polymerase [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene55991 SustainPine v3.0 230
AutoFact: RNA-directed RNA polymerase n=6 Tax=Solanum RepID=Q9ZR58_SOLLC 6.0e-09
FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: RNA-directed RNA polymerase, putative 1.017e-17
Internal
sp_v3.0_unigene57703 SustainPine v3.0 384
AutoFact: RNA-directed RNA Polymerase (Fragment) n=1 Tax=Vigna unguiculata RepID=Q75ZN6_VIGUN 5.0e-16
FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene61182 SustainPine v3.0 170
AutoFact: RNA-dependent RNA polymerase 2 n=2 Tax=Arabidopsis RepID=RDR2_ARATH 1.0e-14
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase 1.492e-20
Internal
sp_v3.0_unigene106801 SustainPine v3.0 328
AutoFact: RNA-directed RNA polymerase [Petunia x hybrida] 5.0e-32
FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Rna-dependent RNA polymerase 1.769e-23
Internal
sp_v3.0_unigene108367 SustainPine v3.0 189
AutoFact: RNA-dependent RNA polymerase n=2 Tax=Gossypium hirsutum RepID=B2B9K0_GOSHI 3.0e-12
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148529 SustainPine v3.0 248
AutoFact: RNA-directed RNA Polymerase (Fragment) n=1 Tax=Vigna unguiculata RepID=Q75ZN6_VIGUN 3.0e-16
FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain