Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene48818 SustainPine v3.0 249
AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCI3_CUCME 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56304 SustainPine v3.0 429
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene56708 SustainPine v3.0 376
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61495 SustainPine v3.0 324
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T392_RICCO 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 5.385e-17
Internal
sp_v3.0_unigene61693 SustainPine v3.0 252
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.123e-11
Internal
sp_v3.0_unigene63120 SustainPine v3.0 190
AutoFact: Ankyrin; Pentatricopeptide repeat [Medicago truncatula] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EMB2261 putative 1.658e-09
Internal
sp_v3.0_unigene63721 SustainPine v3.0 177
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650 gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73396 SustainPine v3.0 332
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 2.238e-09
C-terminus
sp_v3.0_unigene80527 SustainPine v3.0 161
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9M2Y4.1|PP276_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49740 emb|CAB66912.1| putative protein [Arabidopsis thaliana] gb|AEE78584.1| pentatricopeptide repeat- 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os01g0848300 protein 6.823e-06
Internal
sp_v3.0_unigene103345 SustainPine v3.0 433
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.831e-10
Internal
sp_v3.0_unigene121973 SustainPine v3.0 219
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 6.26e-13
Internal
sp_v3.0_unigene142484 SustainPine v3.0 320
AutoFact: Pentatricopeptide, putative n=3 Tax=Oryza sativa RepID=Q10MA5_ORYSJ 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene168259 SustainPine v3.0 238
AutoFact: Putative Putative Pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Brassica oleracea RepID=Q5FAL7_BRAOL 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.597e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain