Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene263 SustainPine v3.0 2184
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 2.765e-09
Putative Complete
sp_v3.0_unigene626 SustainPine v3.0 1833
AutoFact: Protein TOPLESS n=5 Tax=Arabidopsis RepID=TPL_ARATH 1.0e-13
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene20893 SustainPine v3.0 1070
AutoFact: WD-repeat protein, putative 6.0e-34
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Os03g0254700 protein 7.797e-06
Internal
sp_v3.0_unigene40424 SustainPine v3.0 1782
AutoFact: Acyl_transf_3 multi-domain protein 1.0e-05
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-40 repeat protein-like 2.6e-07
Internal
sp_v3.0_unigene40437 SustainPine v3.0 455
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] gb|AEE36411.1| Topless-related protein 1 [Arabidopsis thaliana] 1.0e-23
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 1.688e-09
Internal
sp_v3.0_unigene42323 SustainPine v3.0 1581
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-06
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.13e-09
C-terminus
sp_v3.0_unigene42435 SustainPine v3.0 611
AutoFact: WD-40 repeat protein-like [Populus suaveolens] 3.99931e-42
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.28e-07
Internal
sp_v3.0_unigene60568 SustainPine v3.0 429
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.267e-07
Internal
sp_v3.0_unigene67230 SustainPine v3.0 225
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Internal
sp_v3.0_unigene71287 SustainPine v3.0 330
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 8.705e-12
N-terminus
sp_v3.0_unigene73816 SustainPine v3.0 362
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 4.0e-11
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75729 SustainPine v3.0 339
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene76464 SustainPine v3.0 290
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 4.0e-16
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.816e-09
Internal
sp_v3.0_unigene76613 SustainPine v3.0 404
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene131093 SustainPine v3.0 300
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 0.0
Sma3: WD-repeat protein, putative 4.978e-10
Internal
sp_v3.0_unigene131400 SustainPine v3.0 349
AutoFact: [R] COG2319 FOG: WD40 repeat 6.0e-07
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.075e-09
Internal
sp_v3.0_unigene132230 SustainPine v3.0 461
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 4.199e-07
Internal
sp_v3.0_unigene137866 SustainPine v3.0 499
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SMF9_RICCO 7.0e-32
FL-Next: Isoform 2 of Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 0.0
Internal
sp_v3.0_unigene139156 SustainPine v3.0 198
AutoFact: WD-repeat protein, putative 2.0e-17
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 4.924e-12
Internal
sp_v3.0_unigene142824 SustainPine v3.0 244
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] gb|AEE36411.1| Topless-related protein 1 [Arabidopsis thaliana] 5.0e-11
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain