Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene29456 SustainPine v3.0 1289
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30993 SustainPine v3.0 529
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 3.487e-11
N-terminus
sp_v3.0_unigene80865 SustainPine v3.0 259
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.473e-14
Putative C-terminus
sp_v3.0_unigene152420 SustainPine v3.0 484
AutoFact: putative elongation factor 1 beta [Triatoma infestans] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 1.117e-11
Putative C-terminus
sp_v3.0_unigene153291 SustainPine v3.0 423
AutoFact: Elongation factor 1-beta n=2 Tax=Leishmania mexicana MHOM/GT/2001/U1103 RepID=E9B4Q3_LEIME 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 4.14e-15
C-terminus
sp_v3.0_unigene153472 SustainPine v3.0 266
AutoFact: Elongation factor 1-beta', putative n=1 Tax=Pediculus humanus corporis RepID=E0VE53_PEDHC 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene154899 SustainPine v3.0 488
AutoFact: similar to GenBank Accession Number AF103726 peptide elongation factor 1-beta in Gallus gallus [Schistosoma japonicum] emb|CAX76775.1| eukaryotic translation elongation factor 1 beta 2 [Schistosoma japonicum] emb|CAX76776.1| eukaryotic translation elongat 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.22e-14
C-terminus
sp_v3.0_unigene157994 SustainPine v3.0 410
AutoFact: Elongation factor 1b n=1 Tax=Polysphondylium pallidum RepID=D3BEW0_POLPA 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.425e-14
C-terminus
sp_v3.0_unigene163389 SustainPine v3.0 347
AutoFact: Translational elongation factor 1 subunit Bbeta n=1 Tax=Pisum sativum RepID=Q6SZ89_PEA 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.473e-14
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain