Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene29428 SustainPine v3.0 1003
• AutoFact: 30S ribosomal protein S13 [Arabidopsis thaliana] sp|P42732.1|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] emb|CAA88028. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene151729 SustainPine v3.0 471
• AutoFact: 30S ribosomal protein S13 n=3 Tax=Rhodocyclaceae RepID=RS13_AROAE 0.0
• FL-Next: sp=30S ribosomal protein S13, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S13, chloroplastic 6.384e-29
Complete
sp_v3.0_unigene152174 SustainPine v3.0 413
• AutoFact: 30S ribosomal protein S13 n=18 Tax=Xanthomonadaceae RepID=RS13_XANC5 8.40779e-45
• FL-Next: sp=Cyanelle 30S ribosomal protein S13; Cyanophora paradoxa. Plastid; Cyanelle. 0.0
Complete
sp_v3.0_unigene152338 SustainPine v3.0 248
• AutoFact: 30S ribosomal protein S13 n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9RZN7_THEOJ 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene183137 SustainPine v3.0 283
• AutoFact: 30S ribosomal protein S13 n=3 Tax=cellular organisms RepID=RS13_FLAJ1 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S13, chloroplastic 8.362e-12
Putative C-terminus
sp_v3.0_unigene189071 SustainPine v3.0 286
• AutoFact: 30S ribosomal protein S13 n=3 Tax=cellular organisms RepID=RS13_FLAJ1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S13, chloroplastic 2.428e-18
Putative C-terminus
sp_v3.0_unigene202163 SustainPine v3.0 652
• AutoFact: 30S ribosomal protein S13 [Arabidopsis thaliana] sp|P42732.1|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] emb|CAA88028. 7.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: COSII_At5g14320 1.867e-06
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain