Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene19186 SustainPine v3.0 725
• AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB45066.1| putative protein [Arabidopsis thaliana] emb|CAB79341.1| putative protein [Arabidopsis thaliana] gb|AAO44044.1| At4g24310 [Arabidopsis thaliana] dbj|BAF00043.1| hypothetical protein [Arabidopsi 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene20048 SustainPine v3.0 354
• AutoFact: DUF679 domain containing protein 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: cDNA clone:002-152-D03, full insert sequence 5.848e-06
Putative N-terminus
sp_v3.0_unigene21910 SustainPine v3.0 827
• AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB45066.1| putative protein [Arabidopsis thaliana] emb|CAB79341.1| putative protein [Arabidopsis thaliana] gb|AAO44044.1| At4g24310 [Arabidopsis thaliana] dbj|BAF00043.1| hypothetical protein [Arabidopsi 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene24969 SustainPine v3.0 935
• AutoFact: DUF679 domain membrane protein 1 [Arabidopsis thaliana] dbj|BAB02347.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85010.1| unknown protein [Arabidopsis thaliana] gb|AAM45082.1| unknown protein [Arabidopsis thaliana] gb|AEE76519.1| DUF679 domain 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Emb|CAB45066.1 2.745e-09
Complete
sp_v3.0_unigene27868 SustainPine v3.0 1163
• AutoFact: DUF679 domain containing protein 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene30495 SustainPine v3.0 1159
• AutoFact: DUF679 domain containing protein 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene31326 SustainPine v3.0 877
• AutoFact: DUF679 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Emb|CAB45066.1 8.985e-09
Complete
sp_v3.0_unigene33672 SustainPine v3.0 675
• AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB45066.1| putative protein [Arabidopsis thaliana] emb|CAB79341.1| putative protein [Arabidopsis thaliana] gb|AAO44044.1| At4g24310 [Arabidopsis thaliana] dbj|BAF00043.1| hypothetical protein [Arabidopsi 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene101067 SustainPine v3.0 1149
• AutoFact: DUF679 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Emb|CAB45066.1 8.439e-09
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain