Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3946 SustainPine v3.0 3124
• AutoFact: UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] sp|Q9SYM5.1|RHM1_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 1 gb|AAD30579.1|AC007260_10 Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gb|AAK68773.1| Similar to dTDP-D-glu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene8951 SustainPine v3.0 2690
• AutoFact: UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] sp|Q9SYM5.1|RHM1_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 1 gb|AAD30579.1|AC007260_10 Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gb|AAK68773.1| Similar to dTDP-D-glu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RHM1 2.951e-08
Complete
sp_v3.0_unigene63168 SustainPine v3.0 236
• AutoFact: Rhamnose synthase n=1 Tax=Gossypium hirsutum RepID=D2WK33_GOSHI 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene155012 SustainPine v3.0 330
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene163525 SustainPine v3.0 397
• AutoFact: UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] sp|Q9LH76.1|RHM3_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 3 dbj|BAB02645.1| unnamed protein product [Arabidopsis thaliana] gb|AAL84958.1| AT3g14790/T21E2_4 [Arabidopsis thaliana] gb|AAM98 2.0e-22
• FL-Next: sp=Probable rhamnose biosynthetic enzyme 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RHM1 1.165e-08
N-terminus
sp_v3.0_unigene190385 SustainPine v3.0 320
• AutoFact: Dtdp-glucose 4,6-dehydratase n=1 Tax=Thalassiosira pseudonana RepID=B8C5W5_THAPS 6.0e-17
• FL-Next: sp=Probable rhamnose biosynthetic enzyme 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain