Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene26518 SustainPine v3.0 237
AutoFact: Ribosomal protein n=1 Tax=Taenia asiatica RepID=A3F4S3_TAEAS 3.0e-16
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.624e-22
C-terminus
sp_v3.0_unigene28405 SustainPine v3.0 330
AutoFact: Ribosomal protein n=1 Tax=Caenorhabditis elegans RepID=Q95Y46_CAEEL 4.0e-24
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.108e-29
C-terminus
sp_v3.0_unigene32176 SustainPine v3.0 535
AutoFact: Ribosomal protein n=1 Tax=Taenia asiatica RepID=A3F4S3_TAEAS 3.00004e-41
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 9.308e-36
C-terminus
sp_v3.0_unigene72041 SustainPine v3.0 323
AutoFact: 60S ribosomal protein L10a n=41 Tax=Euteleostomi RepID=RL10A_HUMAN 2.0e-38
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 4.118e-16
Putative N-terminus
sp_v3.0_unigene74408 SustainPine v3.0 261
AutoFact: PREDICTED: similar to L10a n=1 Tax=Hydra magnipapillata RepID=UPI0001927716 4.0e-19
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 2.573e-36
C-terminus
sp_v3.0_unigene75058 SustainPine v3.0 266
AutoFact: 60s ribosomal protein L10A n=1 Tax=Glossina morsitans morsitans RepID=D3TMC2_GLOMM 4.0e-29
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.605e-34
Internal
sp_v3.0_unigene77025 SustainPine v3.0 201
AutoFact: Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|A Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 4.0e-16
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 5.82e-30
Internal
sp_v3.0_unigene151050 SustainPine v3.0 345
AutoFact: S60 ribosomal protein L10a n=1 Tax=Polysphondylium pallidum RepID=D3BAC7_POLPA 6.0e-30
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 3.93e-29
Putative C-terminus
sp_v3.0_unigene151324 SustainPine v3.0 264
AutoFact: PREDICTED: similar to L10a n=1 Tax=Hydra magnipapillata RepID=UPI0001927716 1.0e-19
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.366e-36
C-terminus
sp_v3.0_unigene154912 SustainPine v3.0 252
AutoFact: PREDICTED: 60S ribosomal protein L10a-like n=1 Tax=Pongo abelii RepID=UPI0001D5E81F 1.0e-24
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 8.052e-33
C-terminus
sp_v3.0_unigene157882 SustainPine v3.0 393
AutoFact: Ribosomal protein n=1 Tax=Taenia asiatica RepID=A3F4S3_TAEAS 2.0e-17
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 8.071e-30
C-terminus
sp_v3.0_unigene158718 SustainPine v3.0 445
AutoFact: Ribosomal protein n=1 Tax=Trypanosoma cruzi RepID=E7LJ50_TRYCR 6.0e-40
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.159e-35
C-terminus
sp_v3.0_unigene186297 SustainPine v3.0 436
AutoFact: Ribosomal protein n=2 Tax=Ixodes scapularis RepID=B7P3X5_IXOSC 3.9937e-43
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 2.512e-38
C-terminus
sp_v3.0_unigene186578 SustainPine v3.0 476
AutoFact: Ribosomal protein n=1 Tax=Fenneropenaeus merguiensis RepID=C7SQT0_FENME 1.99993e-41
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 7.918e-38
C-terminus
sp_v3.0_unigene192823 SustainPine v3.0 468
AutoFact: Ribosomal protein n=1 Tax=Daphnia pulex RepID=E9GI92_DAPPU 8.0e-33
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 4.077e-33
C-terminus
sp_v3.0_unigene199651 SustainPine v3.0 319
AutoFact: 60S ribosomal protein L10a-3 n=9 Tax=rosids RepID=R10A3_ARATH 1.0e-21
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 8.052e-33
C-terminus
sp_v3.0_unigene204610 SustainPine v3.0 275
AutoFact: 60S ribosomal protein L10a-3 n=9 Tax=rosids RepID=R10A3_ARATH 2.0e-17
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 6.448e-33
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain