Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1391 SustainPine v3.0 1721
• AutoFact: polygalacturonase [Arabidopsis thaliana] gb|AEE30389.1| polygalacturonase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
Complete
sp_v3.0_unigene14256 SustainPine v3.0 933
• AutoFact: polygalacturonase [Arabidopsis thaliana] gb|AEE30389.1| polygalacturonase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
C-terminus
sp_v3.0_unigene15897 SustainPine v3.0 1876
• AutoFact: Pectin lyase-like protein n=2 Tax=Arabidopsis RepID=Q9CAL5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
Complete
sp_v3.0_unigene16850 SustainPine v3.0 1559
• AutoFact: Pectin lyase-like protein n=2 Tax=Arabidopsis RepID=Q9CAL5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
Complete
sp_v3.0_unigene43838 SustainPine v3.0 864
• AutoFact: Polygalacturonase n=1 Tax=Solanum lycopersicum RepID=Q9M7D3_SOLLC 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
C-terminus
sp_v3.0_unigene68395 SustainPine v3.0 155
• AutoFact: Os02g0130200 protein n=3 Tax=Oryza sativa RepID=Q0E491_ORYSJ 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene71034 SustainPine v3.0 154
• AutoFact: polygalacturonase [Cucumis sativus] 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pollen allergen 4.604e-09
Internal
sp_v3.0_unigene79109 SustainPine v3.0 409
• AutoFact: putative polygalacturonase [Arabidopsis thaliana] sp|Q94AJ5.1|PGLR5_ARATH RecName: Full=Probable polygalacturonase At1g80170; Short=PG; AltName: Full=Pectinase At1g80170; Flags: Precursor gb|AAK76676.1| putative polygalacturonase [Arabidopsis thaliana] gb 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 6.596e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain