Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene37172 SustainPine v3.0 327
AutoFact: pfam01535, PPR, PPR repeat 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_36, whole genome shotgun sequence 7.822e-06
Internal
sp_v3.0_unigene51930 SustainPine v3.0 351
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SB36.1|PP337_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g25270, chloroplastic; Flags: Precursor emb|CAA23068.1| putative protein [Arabidopsis thaliana] emb|CAB 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 3.583e-07
Internal
sp_v3.0_unigene54433 SustainPine v3.0 169
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920 gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana] gb|AEE31416.1| pent 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62014 SustainPine v3.0 269
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T4R0_RICCO 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72099 SustainPine v3.0 229
AutoFact: pentatricopeptide (PPR) repeat-containing protein 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81160 SustainPine v3.0 167
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920 gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana] gb|AEE31416.1| pent 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167113 SustainPine v3.0 315
AutoFact: pfam01535, PPR, PPR repeat 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167723 SustainPine v3.0 172
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 4.951e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain