Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene31157 SustainPine v3.0 494
AutoFact: PREDICTED: ribosomal protein L27a-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA6E4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.445e-12
Complete
sp_v3.0_unigene32593 SustainPine v3.0 613
AutoFact: PREDICTED: ribosomal protein L27a-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA6E4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.483e-12
Complete
sp_v3.0_unigene73868 SustainPine v3.0 356
AutoFact: 60S ribosomal protein L27A [Arabidopsis thaliana] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.674e-16
N-terminus
sp_v3.0_unigene128022 SustainPine v3.0 721
AutoFact: 60S ribosomal protein L27a-3 [Arabidopsis thaliana] ref|XP_002888788.1| 60S ribosomal protein L27A [Arabidopsis lyrata subsp. lyrata] sp|P49637.2|R27A3_ARATH RecName: Full=60S ribosomal protein L27a-3 gb|AAG52338.1|AC011663_17 60S ribosomal protein L27A; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 2.476e-20
Complete
sp_v3.0_unigene146869 SustainPine v3.0 614
AutoFact: ribosomal large subunit structural protein [Brassica juncea] 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.674e-16
Putative Complete
sp_v3.0_unigene150349 SustainPine v3.0 421
AutoFact: 60S ribosomal protein L27a n=7 Tax=Eukaryota RepID=RL27A_TRYBB 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27a-2 4.997e-12
C-terminus
sp_v3.0_unigene151629 SustainPine v3.0 371
AutoFact: Ribosomal protein L22 (Fragment) n=1 Tax=Argopecten irradians RepID=Q8ITC4_AEQIR 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27a-2 4.997e-12
N-terminus
sp_v3.0_unigene152146 SustainPine v3.0 160
AutoFact: Ribosomal protein L27a n=2 Tax=Chlamydomonadales RepID=A8I2T0_CHLRE 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.099e-16
Putative C-terminus
sp_v3.0_unigene152580 SustainPine v3.0 315
AutoFact: 60S ribosomal protein l27a n=2 Tax=Ictalurus punctatus RepID=E3TEN4_ICTPU 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 7.422e-16
C-terminus
sp_v3.0_unigene154386 SustainPine v3.0 489
AutoFact: Ribosomal protein L27 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WJH4_9STRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.427e-12
Complete
sp_v3.0_unigene155484 SustainPine v3.0 476
AutoFact: ribosomal protein L27a [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.464e-12
Complete
sp_v3.0_unigene155711 SustainPine v3.0 345
AutoFact: Ribosomal protein L27a n=1 Tax=Aplysia californica RepID=C8CCN0_APLCA 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.39e-12
N-terminus
sp_v3.0_unigene155984 SustainPine v3.0 384
AutoFact: 60S ribosomal protein L27a n=7 Tax=Eukaryota RepID=RL27A_TRYBB 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27a-2 3.125e-12
C-terminus
sp_v3.0_unigene157710 SustainPine v3.0 437
AutoFact: 60S ribosomal protein L27a n=1 Tax=Lepeophtheirus salmonis RepID=D3PHZ9_9MAXI 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27a-2 4.997e-12
N-terminus
sp_v3.0_unigene157901 SustainPine v3.0 161
AutoFact: 60S ribosomal protein L28-A n=2 Tax=Schizosaccharomyces pombe 972h- RepID=RL28A_SCHPO 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158967 SustainPine v3.0 452
AutoFact: ribosomal protein L27a [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27a-2 4.997e-12
Putative Complete
sp_v3.0_unigene166624 SustainPine v3.0 393
AutoFact: Probable RPL28-60S large subunit ribosomal protein L27a.e n=1 Tax=Sporisorium reilianum RepID=E7A2M2_9BASI 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27a-2 4.349e-12
C-terminus
sp_v3.0_unigene193535 SustainPine v3.0 278
AutoFact: PREDICTED: ribosomal protein L27a-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA6E4 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.674e-16
N-terminus
sp_v3.0_unigene202622 SustainPine v3.0 526
AutoFact: Zgc:77235 n=13 Tax=Clupeocephala RepID=Q6P2M0_DANRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.39e-12
Complete
sp_v3.0_unigene203570 SustainPine v3.0 502
AutoFact: Ribosomal protein L27 n=2 Tax=Phytophthora infestans RepID=D0N851_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.427e-12
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain