Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene9399 SustainPine v3.0 1290
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 9.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein ATL2A 4.95e-07
Putative Complete
sp_v3.0_unigene15217 SustainPine v3.0 803
• AutoFact: RING-H2 finger protein ATL1L, putative n=1 Tax=Ricinus communis RepID=B9S872_RICCO 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene16124 SustainPine v3.0 946
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene22845 SustainPine v3.0 910
• AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene24994 SustainPine v3.0 728
• AutoFact: RING-H2 finger protein ATL10 [Arabidopsis thaliana] sp|P0C034.1|ATL10_ARATH RecName: Full=RING-H2 finger protein ATL10 gb|AAY78646.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] gb|AEE32406.1| RING-H2 finger protein ATL10 [A 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene29258 SustainPine v3.0 695
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene31723 SustainPine v3.0 721
• AutoFact: RING-H2 finger protein ATL1L, putative n=1 Tax=Ricinus communis RepID=B9S872_RICCO 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene33149 SustainPine v3.0 615
• AutoFact: RING-H2 finger protein ATL72 [Arabidopsis thaliana] sp|Q9SG96.1|ATL72_ARATH RecName: Full=RING-H2 finger protein ATL72 gb|AAF19558.1|AC011708_1 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAO44037.1| At3g10910 [Arabidopsis thaliana] dbj|BA 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene53114 SustainPine v3.0 444
• AutoFact: RING-H2 finger protein ATL74 [Arabidopsis thaliana] sp|Q9LZV8.1|ATL74_ARATH RecName: Full=RING-H2 finger protein ATL74 emb|CAB82758.1| putative protein [Arabidopsis thaliana] gb|AAR20739.1| At5g01880 [Arabidopsis thaliana] gb|AAR24751.1| At5g01880 [Arabid 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein ATL5A 5.535e-11
Putative C-terminus
sp_v3.0_unigene58896 SustainPine v3.0 376
• AutoFact: RING-H2 finger protein ATL74 [Arabidopsis thaliana] sp|Q9LZV8.1|ATL74_ARATH RecName: Full=RING-H2 finger protein ATL74 emb|CAB82758.1| putative protein [Arabidopsis thaliana] gb|AAR20739.1| At5g01880 [Arabidopsis thaliana] gb|AAR24751.1| At5g01880 [Arabid 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene79524 SustainPine v3.0 205
• AutoFact: RING-H2 finger protein ATL77 [Arabidopsis thaliana] sp|Q9LS99.1|ATL77_ARATH RecName: Full=RING-H2 finger protein ATL77 dbj|BAB01804.1| unnamed protein product [Arabidopsis thaliana] gb|AAM64481.1| contains similarity to RING zinc finger protein [Arabidops 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein ATL1R 2.827e-07
Internal
sp_v3.0_unigene93841 SustainPine v3.0 882
• AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene159747 SustainPine v3.0 362
• AutoFact: Similarity to RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9LS98_ARATH 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 3.886e-12
C-terminus
sp_v3.0_unigene183721 SustainPine v3.0 379
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0S4_RICCO 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 2.587e-08
C-terminus
sp_v3.0_unigene184028 SustainPine v3.0 411
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain