Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10388 SustainPine v3.0 1922
AutoFact: glucose-methanol-choline (GMC) oxidoreductase-like protein [Arabidopsis thaliana] gb|AAU05540.1| At1g12570 [Arabidopsis thaliana] gb|AEE28898.1| glucose-methanol-choline (GMC) oxidoreductase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 4.172e-15
Complete
sp_v3.0_unigene17887 SustainPine v3.0 2258
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TW84_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 6.274e-15
Complete
sp_v3.0_unigene17992 SustainPine v3.0 2044
AutoFact: [E] COG2303 Choline dehydrogenase and related flavoproteins 1.0e-31
FL-Next: sp=Protein HOTHEAD; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein HOTHEAD 4.269e-15
Complete
sp_v3.0_unigene31508 SustainPine v3.0 404
AutoFact: Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] gb|AAK56275.1|AF367287_1 AT5g51950/MSG15_3 [Arabidopsis thaliana] gb|AAP21162.1| At5g51950/MSG15_3 [Arabidopsis thaliana] gb|AED96149.1| Glucose-methanol-choline (GMC) oxi 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 1.619e-11
C-terminus
sp_v3.0_unigene34749 SustainPine v3.0 403
AutoFact: OSJNBa0019K04.7 protein n=3 Tax=Oryza sativa RepID=Q7XTZ0_ORYSJ 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 9.317e-16
C-terminus
sp_v3.0_unigene58319 SustainPine v3.0 370
AutoFact: OSJNBa0019K04.7 protein n=3 Tax=Oryza sativa RepID=Q7XTZ0_ORYSJ 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 1.121e-15
C-terminus
sp_v3.0_unigene74603 SustainPine v3.0 242
AutoFact: OSJNBa0019K04.7 protein n=3 Tax=Oryza sativa RepID=Q7XTZ0_ORYSJ 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative mandelonitrile lyase 8.845e-11
C-terminus
sp_v3.0_unigene80232 SustainPine v3.0 189
AutoFact: GMC oxidoreductase family protein n=2 Tax=Oryza sativa RepID=Q8H052_ORYSJ 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mandelonitrile lyase-like protein 1.426e-09
Internal
sp_v3.0_unigene101659 SustainPine v3.0 502
AutoFact: ABC transporter related; Choline dehydrogenase [Medicago truncatula] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 1.665e-15
C-terminus
sp_v3.0_unigene118422 SustainPine v3.0 190
AutoFact: Protein HOTHEAD n=3 Tax=Arabidopsis RepID=HTH_ARATH 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene129354 SustainPine v3.0 620
AutoFact: Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] gb|AAL09718.1| AT3g56060/F18O21_20 [Arabidopsis thaliana] gb|AEE79472.1| Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 9.957e-16
C-terminus
sp_v3.0_unigene133873 SustainPine v3.0 288
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7U005_VITVI 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 3.831e-15
C-terminus
sp_v3.0_unigene144822 SustainPine v3.0 758
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TW84_VITVI 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 9.527e-16
N-terminus
sp_v3.0_unigene155580 SustainPine v3.0 463
AutoFact: Mandelonitrile lyase-like protein n=3 Tax=Arabidopsis thaliana RepID=Q9FJ99_ARATH 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene191183 SustainPine v3.0 497
AutoFact: glucose-methanol-choline (GMC) oxidoreductase-like protein [Arabidopsis thaliana] gb|AAU05540.1| At1g12570 [Arabidopsis thaliana] gb|AEE28898.1| glucose-methanol-choline (GMC) oxidoreductase-like protein [Arabidopsis thaliana] 1.0e-16
FL-Next: tr=Putative uncharacterized protein At1g72970; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein HOTHEAD 7.494e-16
Complete
sp_v3.0_unigene198233 SustainPine v3.0 490
AutoFact: [E] COG2303 Choline dehydrogenase and related flavoproteins 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain