Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene27189 SustainPine v3.0 584
AutoFact: Rac [Aplysia californica] gb|AAP22281.1| Rac [Aplysia californica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.41e-17
Putative Complete
sp_v3.0_unigene32598 SustainPine v3.0 722
AutoFact: Rho GTPase n=1 Tax=Polysphondylium pallidum RepID=D3BBX9_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.218e-17
Complete
sp_v3.0_unigene35764 SustainPine v3.0 622
AutoFact: Rho GTPase n=1 Tax=Dictyostelium fasciculatum RepID=F4QA18_9MYCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 1.301e-17
Putative C-terminus
sp_v3.0_unigene80669 SustainPine v3.0 262
AutoFact: [R] COG1100 GTPase SAR1 and related small G proteins 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 1.996e-17
Putative N-terminus
sp_v3.0_unigene81347 SustainPine v3.0 229
AutoFact: Rho GTPase Rac, putative [Penicillium marneffei ATCC 18224] gb|AAN77094.1| CDC42-like protein CflB [Penicillium marneffei] gb|EEA19598.1| Rho GTPase Rac, putative [Penicillium marneffei ATCC 18224] 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTPase protein ROP4 4.061e-08
Internal
sp_v3.0_unigene149276 SustainPine v3.0 278
AutoFact: RAS-related C3 botulinum substrate 1, isoform CRA_b [Mus musculus] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.681e-17
N-terminus
sp_v3.0_unigene150873 SustainPine v3.0 418
AutoFact: Small GTP binding protein RAC1 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CIX5_9EUKA 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene150985 SustainPine v3.0 342
AutoFact: PREDICTED: ras-related protein Rac1 isoform 1 [Apis mellifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.385e-17
Putative N-terminus
sp_v3.0_unigene152055 SustainPine v3.0 426
AutoFact: Rho GTPase n=1 Tax=Polysphondylium pallidum RepID=D3BBX9_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 1.535e-17
Putative C-terminus
sp_v3.0_unigene153653 SustainPine v3.0 231
AutoFact: PREDICTED: ras-related C3 botulinum toxin substrate 1-like n=1 Tax=Monodelphis domestica RepID=UPI00020F6F76 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Rac GTPase 6.335e-06
Internal
sp_v3.0_unigene153739 SustainPine v3.0 155
AutoFact: PREDICTED: 40S ribosomal protein S0-like n=1 Tax=Macaca mulatta RepID=UPI0001D55728 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 1.975e-17
Internal
sp_v3.0_unigene153886 SustainPine v3.0 349
AutoFact: Small GTPase rac1p n=2 Tax=Schizophyllum commune RepID=D8PQR4_SCHCM 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.749e-17
N-terminus
sp_v3.0_unigene154388 SustainPine v3.0 158
AutoFact: PREDICTED: ras-related C3 botulinum toxin substrate 1-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBAA25 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.336e-17
Internal
sp_v3.0_unigene154483 SustainPine v3.0 377
AutoFact: Rho GTPase n=1 Tax=Polysphondylium pallidum RepID=D3BBX9_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rac gtpase, putative 2.295e-19
Putative C-terminus
sp_v3.0_unigene154950 SustainPine v3.0 441
AutoFact: Ras-related protein Rac2 n=5 Tax=melanogaster subgroup RepID=RAC2_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.195e-17
N-terminus
sp_v3.0_unigene155290 SustainPine v3.0 165
AutoFact: RAC, RHO family GTPase n=2 Tax=Phaeophyceae RepID=D8LIW3_ECTSI 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.184e-17
Internal
sp_v3.0_unigene156007 SustainPine v3.0 116
AutoFact: PREDICTED: similar to RacA, partial n=1 Tax=Nasonia vitripennis RepID=UPI00015B4351 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene156065 SustainPine v3.0 154
AutoFact: PREDICTED: ras-related C3 botulinum toxin substrate 3-like n=1 Tax=Monodelphis domestica RepID=UPI00020F60F5 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rac gtpase, putative 1.013e-15
N-terminus
sp_v3.0_unigene156283 SustainPine v3.0 523
AutoFact: [R] COG1100 GTPase SAR1 and related small G proteins 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rac gtpase, putative 6.805e-11
C-terminus
sp_v3.0_unigene156469 SustainPine v3.0 392
AutoFact: PREDICTED: ras-related C3 botulinum toxin substrate 3-like n=1 Tax=Pongo abelii RepID=UPI0001D60C76 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain