Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene19747 SustainPine v3.0 902
• AutoFact: DNA polymerase kappa subunit n=3 Tax=Arabidopsis thaliana RepID=Q6JDV7_ARATH 0.0
• FL-Next: Isoform 2 of DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 0.0
• Sma3: Putative DNA-directed polymerase, having alternative splicing products 2.032e-09
Internal
sp_v3.0_unigene40693 SustainPine v3.0 566
• AutoFact: DNA polymerase kappa subunit [Arabidopsis thaliana] gb|AAS91582.1| DNA-directed polymerase kappa [Arabidopsis thaliana] gb|AEE32503.1| DNA polymerase kappa subunit [Arabidopsis thaliana] 0.0
• FL-Next: Isoform 4 of DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 0.0
• Sma3: Putative DNA-directed polymerase, having alternative splicing products 1.945e-09
Internal
sp_v3.0_unigene45170 SustainPine v3.0 169
• AutoFact: DNA polymerase kappa subunit n=3 Tax=Arabidopsis thaliana RepID=Q6JDV7_ARATH 4.0e-15
• FL-Next: tr=F2J10.13 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative DNA-directed polymerase, having alternative splicing products 9.277e-10
Internal
sp_v3.0_unigene61713 SustainPine v3.0 225
• AutoFact: DNA polymerase kappa subunit [Arabidopsis thaliana] gb|AAS91582.1| DNA-directed polymerase kappa [Arabidopsis thaliana] gb|AEE32503.1| DNA polymerase kappa subunit [Arabidopsis thaliana] 2.0e-19
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Putative DNA-directed polymerase, having alternative splicing products 9.576e-10
Internal
sp_v3.0_unigene70490 SustainPine v3.0 434
• AutoFact: DNA polymerase IV n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDT5_ACIJO 0.0
• FL-Next: sp=DNA repair protein REV1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene79087 SustainPine v3.0 401
• AutoFact: DNA polymerase kappa n=2 Tax=Coprinopsis cinerea RepID=B5BUV5_COPCI 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Chlorella variabilis (Green alga). 0.0
Internal
sp_v3.0_unigene162830 SustainPine v3.0 307
• AutoFact: putative DNA-directed polymerase, having alternative splicing products [Oryza sativa Japonica Group] 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain