Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: 40S ribosomal protein S20-1 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3521 SustainPine v3.0 1014
• AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene27871 SustainPine v3.0 490
• AutoFact: PREDICTED: 40S ribosomal protein S20-like n=1 Tax=Callithrix jacchus RepID=UPI0001D37BF4 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit 0.0
Complete
sp_v3.0_unigene31087 SustainPine v3.0 526
• AutoFact: ribosomal protein S20 [Crassostrea gigas] 0.0
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Complete
sp_v3.0_unigene31592 SustainPine v3.0 584
• AutoFact: Ribosomal protein S20 n=2 Tax=Branchiostoma RepID=Q8MZR7_BRABE 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.267e-14
Complete
sp_v3.0_unigene58338 SustainPine v3.0 443
• AutoFact: Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gb|ABO95159.1| Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.591e-18
Putative Complete
sp_v3.0_unigene152039 SustainPine v3.0 457
• AutoFact: Putative ribosomal protein S20 n=1 Tax=Barentsia elongata RepID=A8UAG4_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.591e-18
Putative Complete
sp_v3.0_unigene152394 SustainPine v3.0 450
• AutoFact: Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gb|ABO95159.1| Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene154402 SustainPine v3.0 316
• AutoFact: 40S ribosomal protein S20 n=68 Tax=Coelomata RepID=RS20_HUMAN 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
N-terminus
sp_v3.0_unigene155739 SustainPine v3.0 381
• AutoFact: S20e ribosomal protein [Dascillus cervinus] 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.591e-18
Putative Complete
sp_v3.0_unigene155760 SustainPine v3.0 505
• AutoFact: PREDICTED: 40S ribosomal protein S20 isoform 2 [Pan troglodytes] 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.218e-14
Complete
sp_v3.0_unigene188714 SustainPine v3.0 542
• AutoFact: Ribosomal protein S20 n=2 Tax=Chlamydomonadales RepID=A8J8M9_CHLRE 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S20 0.0
Complete
sp_v3.0_unigene190092 SustainPine v3.0 411
• AutoFact: ribosomal protein S20 [Chlamys farreri] 0.0
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Complete
sp_v3.0_unigene192332 SustainPine v3.0 391
• AutoFact: Ribosomal protein S20 n=1 Tax=Lepidochitona cinerea RepID=E3P7H4_9MOLL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Complete
sp_v3.0_unigene204486 SustainPine v3.0 400
• AutoFact: 40S ribosomal protein S20 [Aedes aegypti] gb|AAV90710.1| 40S ribosomal protein S20 [Aedes albopictus] gb|ABF18048.1| 40S ribosomal protein S20 [Aedes aegypti] gb|EAT38623.1| 40S ribosomal protein S20 [Aedes aegypti] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.591e-18
Complete
sp_v3.0_unigene205441 SustainPine v3.0 466
• AutoFact: Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gb|ABO95159.1| Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Complete
sp_v3.0_unigene207704 SustainPine v3.0 912
• AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene208599 SustainPine v3.0 303
• AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
N-terminus
sp_v3.0_unigene209725 SustainPine v3.0 534
• AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 8.00001e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain