Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: paired amphipathic helix protein Sin3-like 3 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene46039 SustainPine v3.0 661
AutoFact: paired amphipathic helix repeat-containing protein / transcription regulator-related [Musa acuminata] 4.0e-22
FL-Next: sp=Paired amphipathic helix protein Sin3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 9.484e-17
Internal
sp_v3.0_unigene67809 SustainPine v3.0 165
AutoFact: pfam02671, PAH, Paired amphipathic helix repeat 7.0e-09
FL-Next: sp=Paired amphipathic helix protein Sin3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SIN3 component, histone deacetylase complex 1.318e-09
Internal
sp_v3.0_unigene68352 SustainPine v3.0 221
AutoFact: Paired amphipathic helix repeat-containing protein / transcription regulator-related n=1 Tax=Musa acuminata RepID=Q1EPA1_MUSAC 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 1.139e-12
Putative C-terminus
sp_v3.0_unigene102207 SustainPine v3.0 297
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 6.0e-11
FL-Next: sp=Paired amphipathic helix protein Sin3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 5.351e-17
Internal
sp_v3.0_unigene117579 SustainPine v3.0 174
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 2.0e-10
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain