Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: histone-binding protein RBBP4 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2549 SustainPine v3.0 1984
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene4118 SustainPine v3.0 1238
• AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.433e-09
C-terminus
sp_v3.0_unigene8059 SustainPine v3.0 2129
• AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene22932 SustainPine v3.0 1851
• AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene34175 SustainPine v3.0 977
• AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene51229 SustainPine v3.0 260
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 5.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-40 repeat-containing protein MSI1 4.959e-09
Internal
sp_v3.0_unigene52446 SustainPine v3.0 273
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene52869 SustainPine v3.0 322
• AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
Putative C-terminus
sp_v3.0_unigene62709 SustainPine v3.0 166
• AutoFact: Probable histone-binding protein Caf1 n=24 Tax=Coelomata RepID=CAF1_DROME 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75989 SustainPine v3.0 204
• AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 1.142e-09
N-terminus
sp_v3.0_unigene79564 SustainPine v3.0 330
• AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene94189 SustainPine v3.0 368
• AutoFact: MSI type nucleosome/chromatin assembly factor C, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q6ASS7_ORYSJ 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene126569 SustainPine v3.0 1318
• AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene152377 SustainPine v3.0 525
• AutoFact: PREDICTED: similar to retinoblastoma-binding protein 4 (rbbp4) [Nasonia vitripennis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene158483 SustainPine v3.0 202
• AutoFact: Histone-binding protein RBBP4 n=2 Tax=Chromadorea RepID=F1L403_ASCSU 6.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome remodeling factor 3.899e-06
Internal
sp_v3.0_unigene159645 SustainPine v3.0 218
• AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-40 repeat-containing protein MSI1 6.427e-09
Internal
sp_v3.0_unigene163333 SustainPine v3.0 241
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 6.675e-10
Internal
sp_v3.0_unigene163686 SustainPine v3.0 141
• AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-40 repeat-containing protein MSI1 4.755e-09
Internal
sp_v3.0_unigene165741 SustainPine v3.0 223
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 1.937e-09
Internal
sp_v3.0_unigene208031 SustainPine v3.0 238
• AutoFact: MSI type nucleosome/chromatin assembly factor C, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q6ASS7_ORYSJ 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain