Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tubulin alpha-6 chain [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene45100 SustainPine v3.0 465
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 4.858e-24
Internal
sp_v3.0_unigene59358 SustainPine v3.0 263
• AutoFact: tubulin alpha-3 chain [Oryza sativa Indica Group] 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.51e-16
Internal
sp_v3.0_unigene59450 SustainPine v3.0 316
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Zea mays RepID=Q9LKY5_MAIZE 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 9.002e-25
Internal
sp_v3.0_unigene64955 SustainPine v3.0 274
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 5.792e-27
Internal
sp_v3.0_unigene75575 SustainPine v3.0 253
• AutoFact: Tubulin alpha-1A chain n=6 Tax=Agaricales RepID=TBAA_SCHCO 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.214e-35
Internal
sp_v3.0_unigene76692 SustainPine v3.0 279
• AutoFact: Alpha tubulin n=4 Tax=Agaricales RepID=A8NWX6_COPC7 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.945e-29
Internal
sp_v3.0_unigene79329 SustainPine v3.0 358
• AutoFact: Alhpa-tubulin 3 n=1 Tax=Reticulomyxa filosa RepID=O44024_RETFI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 3.342e-37
Internal
sp_v3.0_unigene80247 SustainPine v3.0 269
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Capsellina sp. ATCC 50039 RepID=E2CWH4_9EUKA 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.454e-22
Internal
sp_v3.0_unigene81515 SustainPine v3.0 239
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Zea mays RepID=Q9LKY5_MAIZE 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.017e-22
Internal
sp_v3.0_unigene108446 SustainPine v3.0 532
• AutoFact: Tubulin alpha chain n=1 Tax=Euplotes vannus RepID=TBA_EUPVA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 5.682e-18
Internal
sp_v3.0_unigene125045 SustainPine v3.0 241
• AutoFact: Tubulin alpha-1 chain n=5 Tax=Coelomata RepID=F4WDI4_9HYME 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 8.717e-26
Putative C-terminus
sp_v3.0_unigene143737 SustainPine v3.0 594
• AutoFact: alpha-tubulin [Eucalyptus grandis] 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.885e-10
Putative C-terminus
sp_v3.0_unigene144162 SustainPine v3.0 784
• AutoFact: Tubulin alpha chain, putative n=14 Tax=Alveolata RepID=C5K635_9ALVE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.088e-21
Complete
sp_v3.0_unigene146086 SustainPine v3.0 982
• AutoFact: Tubulin alpha subunit n=11 Tax=Eukaryota RepID=B1NHW5_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 3.286e-14
Misassembled
sp_v3.0_unigene146176 SustainPine v3.0 318
• AutoFact: Tubulin alpha 3 chain (Fragment) n=5 Tax=Magnoliophyta RepID=A6MZF8_ORYSI 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.449e-18
Internal
sp_v3.0_unigene146506 SustainPine v3.0 607
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.736e-24
Internal
sp_v3.0_unigene146568 SustainPine v3.0 488
• AutoFact: Alpha-tubulin (Fragment) n=5 Tax=core eudicotyledons RepID=Q9SQ74_GOSHI 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 3.033e-16
Putative Complete
sp_v3.0_unigene146602 SustainPine v3.0 551
• AutoFact: Tubulin alpha 3 chain (Fragment) n=5 Tax=Magnoliophyta RepID=A6MZF8_ORYSI 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.086e-13
Putative Complete
sp_v3.0_unigene150142 SustainPine v3.0 438
• AutoFact: Alpha tubulin (Fragment) n=1 Tax=Acanthamoeba polyphaga RepID=Q102R7_ACAPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.808e-20
Internal
sp_v3.0_unigene162764 SustainPine v3.0 123
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Oxyrrhis marina RepID=D2YYD2_OXYMA 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.446e-20
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain