Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: carbon catabolite repressor protein 4-like 1 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1686 SustainPine v3.0 2984
AutoFact: carbon catabolite repressor protein 4-like 1 [Arabidopsis thaliana] sp|Q8W0Z9.1|CCR4A_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 1; Short=CCR4 homolog 1 gb|AAL58932.1|AF462845_1 AT3g58560/F14P22_150 [Arabidopsis thaliana] gb|AAM9136 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene68983 SustainPine v3.0 360
AutoFact: gpm725; LOC100279626; K12603 CCR4-NOT transcription complex subunit 6 [EC:3.1.-.-] 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene70064 SustainPine v3.0 492
AutoFact: gpm725; LOC100279626; K12603 CCR4-NOT transcription complex subunit 6 [EC:3.1.-.-] 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene73638 SustainPine v3.0 273
AutoFact: carbon catabolite repressor protein 4-like 1 [Arabidopsis thaliana] sp|Q8W0Z9.1|CCR4A_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 1; Short=CCR4 homolog 1 gb|AAL58932.1|AF462845_1 AT3g58560/F14P22_150 [Arabidopsis thaliana] gb|AAM9136 1.0e-14
FL-Next: sp=Carbon catabolite repressor protein 4 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene115830 SustainPine v3.0 370
AutoFact: Carbon catabolite repressor protein 4 homolog 1 n=2 Tax=Arabidopsis RepID=CCR4A_ARATH 2.0e-22
FL-Next: sp=Carbon catabolite repressor protein 4 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene126987 SustainPine v3.0 1029
AutoFact: Pathogenesis-related protein 10 n=1 Tax=Pinus pinaster RepID=D9IWE1_PINPS 0.0
FL-Next: tr=Pathogenesis-related protein 10; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative intracellular pathogenesis-related protein 2.995e-17
Complete
sp_v3.0_unigene209222 SustainPine v3.0 282
AutoFact: CCR4-NOT transcription complex subunit 6 n=1 Tax=Zea mays RepID=B6SJQ2_MAIZE 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain