Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chaperonin CPN60 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3604 SustainPine v3.0 2791
AutoFact: Chaperonin CPN60, mitochondrial n=5 Tax=rosids RepID=CH60A_ARATH 0.0
FL-Next: sp=Chaperonin CPN60, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: HSP60 0.0
Complete
sp_v3.0_unigene10398 SustainPine v3.0 2388
AutoFact: Chaperonin CPN60-1, mitochondrial n=3 Tax=rosids RepID=CH61_CUCMA 0.0
FL-Next: sp=Chaperonin CPN60-2, mitochondrial; Cucurbita maxima (Pumpkin) (Winter squash). 0.0
Sma3: HSP60-2 0.0
Complete
sp_v3.0_unigene63550 SustainPine v3.0 189
AutoFact: Heat shock protein 60 n=1 Tax=Ageratina adenophora RepID=A9QVI6_9ASTR 3.0e-17
FL-Next: sp=Chaperonin CPN60-2, mitochondrial; Cucurbita maxima (Pumpkin) (Winter squash). 0.0
Sma3: Chaperonin-60kD, ch60, putative 3.864e-12
Internal
sp_v3.0_unigene74014 SustainPine v3.0 457
AutoFact: chaperonin-60kD, ch60 [Aedes aegypti] gb|EAT36327.1| chaperonin-60kD, ch60 [Aedes aegypti] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperonin-60kD, ch60, putative 1.127e-11
Putative C-terminus
sp_v3.0_unigene75879 SustainPine v3.0 446
AutoFact: YALI0F02805p n=1 Tax=Yarrowia lipolytica CLIB122 RepID=Q6C342_YARLI 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60 kDa chaperonin, chloroplastic 7.5e-18
Internal
sp_v3.0_unigene150343 SustainPine v3.0 355
AutoFact: chaperonin-60kD, ch60 [Aedes aegypti] gb|EAT36327.1| chaperonin-60kD, ch60 [Aedes aegypti] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HSP60-2 3.225e-08
Putative C-terminus
sp_v3.0_unigene154416 SustainPine v3.0 387
AutoFact: Mitochondriatargeted chaperonin putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WHV2_9STRA 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HSP60-2 1.251e-08
C-terminus
sp_v3.0_unigene154954 SustainPine v3.0 330
AutoFact: Heat shock protein 60 (Fragment) n=1 Tax=Nyctotherus ovalis RepID=Q3LDT0_NYCOV 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperonin CPN60, mitochondrial 3.006e-11
Internal
sp_v3.0_unigene156213 SustainPine v3.0 253
AutoFact: 60 kDa chaperonin n=1 Tax=Magnetospirillum gryphiswaldense RepID=Q6N0B9_9PROT 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperonin-60kD, ch60, putative 9.527e-12
Putative C-terminus
sp_v3.0_unigene157902 SustainPine v3.0 512
AutoFact: Chaperonin 60 n=1 Tax=Polysphondylium pallidum RepID=D3B3I9_POLPA 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperonin-60kD, ch60, putative 2.066e-11
Internal
sp_v3.0_unigene165769 SustainPine v3.0 152
AutoFact: heat shock protein [Coprinopsis cinerea okayama7#130] gb|EAU81548.1| heat shock protein [Coprinopsis cinerea okayama7#130] 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperonin-60kD, ch60, putative 6.153e-12
Putative C-terminus
sp_v3.0_unigene200565 SustainPine v3.0 429
AutoFact: Mitochondrial chaperonin n=1 Tax=Thalassiosira pseudonana RepID=B5YLQ5_THAPS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: groEL protein 2.98477e-43
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain