Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: photosystem II light harvesting complex protein 2.1 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4405 SustainPine v3.0 643
AutoFact: chlorophyll a/b-binding protein [Picea glauca] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.843e-21
Complete
sp_v3.0_unigene53483 SustainPine v3.0 414
AutoFact: light-harvesting chlorophyll-a/b binding protein LhcbM2a [Chlamydomonas incerta] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 0.0
Putative Complete
sp_v3.0_unigene54158 SustainPine v3.0 392
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.444e-14
N-terminus
sp_v3.0_unigene63890 SustainPine v3.0 212
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 8.0e-22
FL-Next: tr=Chlorophyll a/b-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: LHCP 3.801e-25
Internal
sp_v3.0_unigene65738 SustainPine v3.0 174
AutoFact: Light-harvesting complex II protein Lhcb1 n=2 Tax=Magnoliophyta RepID=B9I107_POPTR 2.0e-12
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: LHCP 1.102e-16
Internal
sp_v3.0_unigene77406 SustainPine v3.0 160
AutoFact: Chloroplast light-harvesting complex II protein Lhcbm3 n=1 Tax=Bigelowiella natans RepID=Q9LE97_BIGNA 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 5.957e-16
Internal
sp_v3.0_unigene79943 SustainPine v3.0 135
AutoFact: Major light-harvesting chlorophyll a/b protein 3 n=1 Tax=Dunaliella salina RepID=A8BDJ0_DUNSA 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chlorophyll a-b binding protein of LHCII type I, chloroplastic 4.078e-15
Internal
sp_v3.0_unigene80176 SustainPine v3.0 235
AutoFact: Chloroplast light-harvesting complex I protein Lhca9 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ7_ACEAT 5.0e-17
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Internal
sp_v3.0_unigene127445 SustainPine v3.0 1016
AutoFact: chlorophyll a/b-binding protein [Pinus thunbergii] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 7.591e-31
Misassembled
sp_v3.0_unigene132995 SustainPine v3.0 449
AutoFact: Major light-harvesting complex II protein m10 n=1 Tax=Chlamydomonas reinhardtii RepID=Q8S3U0_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.464e-23
Internal
sp_v3.0_unigene144475 SustainPine v3.0 350
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 5.494e-16
N-terminus
sp_v3.0_unigene144963 SustainPine v3.0 390
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 6.163e-31
Internal
sp_v3.0_unigene146175 SustainPine v3.0 428
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 3.183e-19
N-terminus
sp_v3.0_unigene146252 SustainPine v3.0 388
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 5.239e-17
N-terminus
sp_v3.0_unigene146256 SustainPine v3.0 540
AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.041e-28
N-terminus
sp_v3.0_unigene146267 SustainPine v3.0 349
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 2.0e-19
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 2.742e-16
N-terminus
sp_v3.0_unigene146658 SustainPine v3.0 469
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 4.763e-31
Putative C-terminus
sp_v3.0_unigene146693 SustainPine v3.0 266
AutoFact: Chlorophyll A/B binding protein n=1 Tax=Jatropha curcas RepID=D0F1Q5_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.527e-26
Internal
sp_v3.0_unigene156739 SustainPine v3.0 383
AutoFact: Major light-harvesting complex II protein m10 n=1 Tax=Chlamydomonas reinhardtii RepID=Q8S3U0_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.805e-21
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain