Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: histone H2A [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene32036 SustainPine v3.0 516
AutoFact: Histone H2A n=1 Tax=Chlorella variabilis RepID=E1Z345_9CHLO 8.40779e-45
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene36762 SustainPine v3.0 668
AutoFact: Histone H2A n=3 Tax=Piroplasmida RepID=A7AUI5_BABBO 2.0e-14
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 9.82001e-40
C-terminus
sp_v3.0_unigene42263 SustainPine v3.0 915
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 4.99997e-41
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene42264 SustainPine v3.0 973
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 8.00001e-42
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene42265 SustainPine v3.0 1088
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 9.99967e-42
FL-Next: sp=Histone H2A; Vitis vinifera (Grape). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene49562 SustainPine v3.0 411
AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FWI4_ECTSI 1.0e-23
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene67828 SustainPine v3.0 262
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 8.0e-12
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene70839 SustainPine v3.0 243
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 7.0e-10
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 3.979e-33
N-terminus
sp_v3.0_unigene71612 SustainPine v3.0 170
AutoFact: Histone H2A n=2 Tax=Chlamydomonadales RepID=A8HRZ9_CHLRE 4.0e-15
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Internal
sp_v3.0_unigene72183 SustainPine v3.0 139
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 4.0e-08
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 9.364e-21
Internal
sp_v3.0_unigene97825 SustainPine v3.0 464
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 1.0e-33
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene101905 SustainPine v3.0 466
AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FWI4_ECTSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene117515 SustainPine v3.0 215
AutoFact: Histone H2A n=2 Tax=Selaginella moellendorffii RepID=D8RG98_SELML 2.0e-22
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative C-terminus
sp_v3.0_unigene143382 SustainPine v3.0 262
AutoFact: PREDICTED: similar to H2A histone family, member Z isoform 1 n=1 Tax=Canis lupus familiaris RepID=UPI00005A03C9 1.0e-12
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene154321 SustainPine v3.0 433
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene158725 SustainPine v3.0 391
AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FWI4_ECTSI 1.0e-37
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative C-terminus
sp_v3.0_unigene204907 SustainPine v3.0 377
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 2.0e-34
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain