Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: GATA type zinc finger transcription factor-like protein [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene11734 SustainPine v3.0 1501
• AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 0.0
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23306 SustainPine v3.0 517
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q264_9MYCE 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene142278 SustainPine v3.0 1050
• AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 0.0
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene154425 SustainPine v3.0 232
• AutoFact: LIM-type zinc finger-containing protein [Dictyostelium discoideum AX4] sp|O60952.1|LIME_DICDI RecName: Full=LIM domain-containing protein E; AltName: Full=DdLim gb|AAC05729.1| LIM domain protein [Dictyostelium discoideum] gb|EAL67646.1| LIM-type zinc fing 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene154807 SustainPine v3.0 486
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q264_9MYCE 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene158352 SustainPine v3.0 242
• AutoFact: LIM-type zinc finger-containing protein [Dictyostelium discoideum AX4] sp|O60952.1|LIME_DICDI RecName: Full=LIM domain-containing protein E; AltName: Full=DdLim gb|AAC05729.1| LIM domain protein [Dictyostelium discoideum] gb|EAL67646.1| LIM-type zinc fing 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene158963 SustainPine v3.0 269
• AutoFact: LIM and SH3 protein 1 [Xenopus laevis] gb|AAH44681.1| Lasp1 protein [Xenopus laevis] 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain