Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene9051 SustainPine v3.0 1392
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 2.29e-08
C-terminus
sp_v3.0_unigene34227 SustainPine v3.0 836
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 45 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 6.13e-08
Internal
sp_v3.0_unigene35249 SustainPine v3.0 515
• AutoFact: DEAD box protein P68 [Pisum sativum] 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene43230 SustainPine v3.0 121
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 6.0e-14
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 42 5.167e-09
Internal
sp_v3.0_unigene47812 SustainPine v3.0 1393
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 3.944e-08
C-terminus
sp_v3.0_unigene49757 SustainPine v3.0 584
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 2.114e-07
Internal
sp_v3.0_unigene59875 SustainPine v3.0 327
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 5.37e-08
Internal
sp_v3.0_unigene66458 SustainPine v3.0 349
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 5.379e-09
Internal
sp_v3.0_unigene68265 SustainPine v3.0 227
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 n=3 Tax=Arabidopsis RepID=RH42_ARATH 2.0e-11
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 9.358e-09
Internal
sp_v3.0_unigene80111 SustainPine v3.0 125
• AutoFact: Pre-mRNA-processing ATP-dependent RNA helicase PRP5 n=2 Tax=Agaricales RepID=A8NXX3_COPC7 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene95613 SustainPine v3.0 656
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 8.17e-08
Putative N-terminus
sp_v3.0_unigene97443 SustainPine v3.0 520
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 45 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 5.955e-12
Internal
sp_v3.0_unigene131219 SustainPine v3.0 322
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 n=3 Tax=Arabidopsis RepID=RH42_ARATH 3.0e-28
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 9.358e-09
Internal
sp_v3.0_unigene156459 SustainPine v3.0 486
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana] gb|AEE30041.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana] 6.0e-21
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain