Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: protein CHUP1 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1179 SustainPine v3.0 1132
AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 0.0
FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chloroplast unusual positioning 1B 1.082e-09
Internal
sp_v3.0_unigene11109 SustainPine v3.0 873
AutoFact: chloroplast unusual positioning 1A [Physcomitrella patens] 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene16734 SustainPine v3.0 541
AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene27212 SustainPine v3.0 3903
AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chloroplast unusual positioning 1A 2.694e-09
Complete
sp_v3.0_unigene112918 SustainPine v3.0 265
AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 1.0e-15
FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain