Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4110 SustainPine v3.0 1952
• AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Methyl binding domain protein 4.644e-07
Complete
sp_v3.0_unigene7954 SustainPine v3.0 1155
• AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Methyl binding domain protein 2.518e-07
Putative Complete
sp_v3.0_unigene9689 SustainPine v3.0 1918
• AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Methyl binding domain protein 5.349e-07
Putative Complete
sp_v3.0_unigene40703 SustainPine v3.0 515
• AutoFact: Methyl-CpG-binding domain-containing protein 2 n=2 Tax=Arabidopsis RepID=MBD2_ARATH 3.0e-17
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene44658 SustainPine v3.0 827
• AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 4.0e-39
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Methyl binding domain protein 1.384e-07
N-terminus
sp_v3.0_unigene55980 SustainPine v3.0 391
• AutoFact: putative methyl-binding domain (MBD108) protein [Brachypodium sylvaticum] 1.0e-12
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene122340 SustainPine v3.0 339
• AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 3.0e-31
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Methyl binding domain protein 2.179e-07
Internal
sp_v3.0_unigene142648 SustainPine v3.0 552
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJS0_RICCO 2.0e-20
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Methyl binding domain protein 1.952e-07
Putative C-terminus
sp_v3.0_unigene186710 SustainPine v3.0 348
• AutoFact: Methyl binding domain protein n=1 Tax=Populus trichocarpa RepID=B9HBA4_POPTR 2.0e-08
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain