Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6273 SustainPine v3.0 2140
AutoFact: putative RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene13605 SustainPine v3.0 542
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene57196 SustainPine v3.0 314
AutoFact: U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] dbj|BAB10376.1| RNA helicase [Arabidopsis thaliana] gb|AED97426.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Activating signal cointegrator 1 complex subunit 3, helc1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene64387 SustainPine v3.0 145
AutoFact: putative RNA helicase [Arabidopsis thaliana] 1.0e-09
FL-Next: tr=Activating signal cointegrator 1 complex subunit 3, helc1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene108390 SustainPine v3.0 582
AutoFact: RNA helicase n=4 Tax=Arabidopsis RepID=Q9FNQ1_ARATH 0.0
FL-Next: tr=Activating signal cointegrator 1 complex subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene110713 SustainPine v3.0 329
AutoFact: putative RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene121372 SustainPine v3.0 233
AutoFact: RNA helicase n=4 Tax=Arabidopsis RepID=Q9FNQ1_ARATH 5.0e-16
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Internal
sp_v3.0_unigene129870 SustainPine v3.0 391
AutoFact: RNA helicase n=4 Tax=Arabidopsis RepID=Q9FNQ1_ARATH 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Activating signal cointegrator 1 complex subunit 3, helc1, putative 6.335e-06
Putative N-terminus
sp_v3.0_unigene130632 SustainPine v3.0 333
AutoFact: U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AED97425.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene166232 SustainPine v3.0 438
AutoFact: U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AED97425.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Activating signal cointegrator 1 complex subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene183320 SustainPine v3.0 474
AutoFact: Sec63 domain containing protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain