Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 40S ribosomal protein S4-1 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene26217 SustainPine v3.0 550
AutoFact: ribosomal protein S4e [Biphyllus lunatus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 4.456e-24
N-terminus
sp_v3.0_unigene76543 SustainPine v3.0 301
AutoFact: Ribosomal family S4e containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CBCC9 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 2.819e-14
Internal
sp_v3.0_unigene78220 SustainPine v3.0 240
AutoFact: 40S ribosomal protein S4 n=1 Tax=Postia placenta Mad-698-R RepID=B8P7G3_POSPM 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 1.61e-20
Internal
sp_v3.0_unigene81375 SustainPine v3.0 128
AutoFact: 40s ribosomal protein s4, putative [Toxoplasma gondii RH] 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.858e-17
Internal
sp_v3.0_unigene144244 SustainPine v3.0 632
AutoFact: 40S ribosomal protein S4-3 [Arabidopsis thaliana] sp|Q8VYK6.2|RS43_ARATH RecName: Full=40S ribosomal protein S4-3 gb|AAL16117.1|AF428285_1 AT5g58420/mqj2_10 [Arabidopsis thaliana] gb|AAM64284.1| ribosomal protein S4-like [Arabidopsis thaliana] gb|AED97051 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 4.052e-24
C-terminus
sp_v3.0_unigene152152 SustainPine v3.0 211
AutoFact: 40S ribosomal protein S4 n=1 Tax=Aedes aegypti RepID=Q5QC96_AEDAE 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 7.033e-21
Internal
sp_v3.0_unigene154545 SustainPine v3.0 118
AutoFact: 40S ribosomal protein S4 n=12 Tax=rosids RepID=RS4_GOSHI 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 4.755e-17
N-terminus
sp_v3.0_unigene155093 SustainPine v3.0 237
AutoFact: 40S ribosomal protein S4 n=1 Tax=Dictyostelium discoideum RepID=RS4_DICDI 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene155491 SustainPine v3.0 464
AutoFact: 40S ribosomal protein S4 [Bombyx mori] sp|Q5UAP0.1|RS4_BOMMO RecName: Full=40S ribosomal protein S4 gb|AAV34860.1| ribosomal protein S4 [Bombyx mori] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.504e-24
N-terminus
sp_v3.0_unigene155689 SustainPine v3.0 372
AutoFact: 40S ribosomal protein S4, X isoform, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LEI2_9ALVE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene156512 SustainPine v3.0 320
AutoFact: 40S ribosomal protein S4 n=1 Tax=Dictyostelium discoideum RepID=RS4_DICDI 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene158188 SustainPine v3.0 469
AutoFact: Ribosomal protein S4 n=3 Tax=Polyphaga RepID=D1M809_9CUCU 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene158411 SustainPine v3.0 518
AutoFact: 40S ribosomal protein S4 n=4 Tax=Obtectomera RepID=RS4_BOMMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.504e-24
N-terminus
sp_v3.0_unigene158655 SustainPine v3.0 198
AutoFact: [J] COG1471 Ribosomal protein S4E 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene158678 SustainPine v3.0 264
AutoFact: 40S ribosomal protein S4 n=3 Tax=core eudicotyledons RepID=RS4_SOLTU 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene158843 SustainPine v3.0 249
AutoFact: Ribosomal protein S4, component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S956_OSTLU 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene158877 SustainPine v3.0 268
AutoFact: 40S ribosomal protein S4 n=2 Tax=Tetrahymena thermophila RepID=RS4_TETTH 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene193208 SustainPine v3.0 413
AutoFact: PREDICTED: 40S ribosomal protein S4-like isoform 1 [Apis mellifera] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.504e-24
N-terminus
sp_v3.0_unigene199686 SustainPine v3.0 363
AutoFact: 40S ribosomal protein S4 [Dictyostelium discoideum AX4] sp|P51405.3|RS4_DICDI RecName: Full=40S ribosomal protein S4 gb|AAD04813.1| 40S ribosomal protein S4 [Dictyostelium discoideum] gb|EAL71050.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4] 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene200522 SustainPine v3.0 344
AutoFact: 40S ribosomal protein S4 n=1 Tax=Salmo salar RepID=B5XG61_SALSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.955e-24
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain