Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 60S ribosomal protein L23 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene31160 SustainPine v3.0 590
• AutoFact: RecName: Full=60S ribosomal protein L23 gb|AAA34113.1| 60S ribosomal protein subunit L17 [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 1.151e-10
Complete
sp_v3.0_unigene79409 SustainPine v3.0 243
• AutoFact: 60S ribosomal protein L23 n=2 Tax=Embryophyta RepID=RL23_TORRU 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 7.673e-11
Misassembled
sp_v3.0_unigene79767 SustainPine v3.0 396
• AutoFact: ribosomal protein L17 [Castanea sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23, putative 7.691e-13
C-terminus
sp_v3.0_unigene136162 SustainPine v3.0 212
• AutoFact: 60S ribosomal protein L17 [Picea mariana] 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23 5.577e-11
Misassembled
sp_v3.0_unigene149702 SustainPine v3.0 145
• AutoFact: Ribosomal protein rpl23 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UB41_9EUKA 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 5.466e-11
Internal
sp_v3.0_unigene150364 SustainPine v3.0 228
• AutoFact: Ribosomal protein L23-like protein (Fragment) n=1 Tax=Cherax quadricarinatus RepID=Q4VS19_CHEQU 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23 7.905e-11
C-terminus
sp_v3.0_unigene150426 SustainPine v3.0 197
• AutoFact: 60S ribosomal protein L23 n=1 Tax=Harpegnathos saltator RepID=E2C326_9HYME 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23 1.432e-10
Putative C-terminus
sp_v3.0_unigene154395 SustainPine v3.0 246
• AutoFact: RL23_AEDAE 60S ribosomal protein L23 (L17A) n=2 Tax=Ustilaginaceae RepID=Q4P8N0_USTMA 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23 1.611e-10
C-terminus
sp_v3.0_unigene155159 SustainPine v3.0 360
• AutoFact: Putative ribosomal protein L23 (Fragment) n=1 Tax=Pomphorhynchus laevis RepID=A9J5R6_9BILA 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 1.151e-10
C-terminus
sp_v3.0_unigene156003 SustainPine v3.0 402
• AutoFact: 60S ribosomal protein L23 n=54 Tax=Deuterostomia RepID=RL23_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 1.151e-10
C-terminus
sp_v3.0_unigene156545 SustainPine v3.0 435
• AutoFact: Ribosomal protein L17 homolog (Fragment) n=3 Tax=Euteleostomi RepID=Q9YHX0_DICLA 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 6.064e-11
C-terminus
sp_v3.0_unigene157589 SustainPine v3.0 304
• AutoFact: 60S ribosomal protein L23 n=58 Tax=Bilateria RepID=RL23_DROME 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 1.151e-10
Putative C-terminus
sp_v3.0_unigene160487 SustainPine v3.0 499
• AutoFact: Ribosomal protein L23 (Fragment) n=1 Tax=Camellia sinensis RepID=F4YFF4_CAMSI 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23, putative 9.505e-09
Putative C-terminus
sp_v3.0_unigene163466 SustainPine v3.0 88
• AutoFact: 60S ribosomal protein L23 n=2 Tax=Schizosaccharomyces RepID=RL23_SCHPO 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165470 SustainPine v3.0 274
• AutoFact: 60S ribosomal protein L23 n=1 Tax=Harpegnathos saltator RepID=E2C326_9HYME 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 1.151e-10
C-terminus
sp_v3.0_unigene188913 SustainPine v3.0 377
• AutoFact: Putative ribosomal protein L23 (Fragment) n=1 Tax=Pomphorhynchus laevis RepID=A9J5R6_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 1.151e-10
C-terminus
sp_v3.0_unigene198480 SustainPine v3.0 286
• AutoFact: 60S ribosomal protein L23, putative n=6 Tax=Plasmodium RepID=A5K7W5_PLAVS 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 2.274e-11
N-terminus
sp_v3.0_unigene204577 SustainPine v3.0 434
• AutoFact: 60S ribosomal protein L23 n=3 Tax=Oomycetes RepID=D0MUG8_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 1.151e-10
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain