Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Elongation factor 1-alpha [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene64364 SustainPine v3.0 174
AutoFact: translation elongation factor-1 alpha [Picea abies] 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.157e-33
Putative N-terminus
sp_v3.0_unigene65088 SustainPine v3.0 259
AutoFact: RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene65477 SustainPine v3.0 162
AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 2.0e-11
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.575e-16
Internal
sp_v3.0_unigene65508 SustainPine v3.0 126
AutoFact: Elongation factor 1-alpha-like protein (Fragment) n=6 Tax=Spermatophyta RepID=D3G8A2_LOLPR 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 5.213e-24
Internal
sp_v3.0_unigene65645 SustainPine v3.0 217
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene73753 SustainPine v3.0 451
AutoFact: translation elongation factor-1 alpha [Picea abies] 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene73900 SustainPine v3.0 420
AutoFact: Elongation factor 1 alpha (Fragment) n=3 Tax=Agaricales RepID=Q2HXZ3_9AGAR 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.638e-25
Internal
sp_v3.0_unigene74632 SustainPine v3.0 286
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene75942 SustainPine v3.0 269
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene76030 SustainPine v3.0 301
AutoFact: Elongation factor 1 alpha (Fragment) n=3 Tax=Eukaryota RepID=A7J577_9LECA 1.99993e-41
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 9.927e-22
Internal
sp_v3.0_unigene77038 SustainPine v3.0 140
AutoFact: Elongation factor 1-alpha-like protein (Fragment) n=6 Tax=Spermatophyta RepID=D3G8A2_LOLPR 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene77187 SustainPine v3.0 250
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative N-terminus
sp_v3.0_unigene77204 SustainPine v3.0 217
AutoFact: Translation elongation factor 1A-like protein (Fragment) n=1 Tax=Reticulomyxa filosa RepID=B5A4Q1_RETFI 3.0e-26
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor-like 4.336e-32
Internal
sp_v3.0_unigene78369 SustainPine v3.0 223
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative N-terminus
sp_v3.0_unigene79081 SustainPine v3.0 194
AutoFact: translation elongation factor 1 alpha [Plantago major] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Misassembled
sp_v3.0_unigene79934 SustainPine v3.0 250
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 2.0e-29
FL-Next: sp=Elongation factor 1-alpha; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene79939 SustainPine v3.0 121
AutoFact: Elongation factor 1-alpha n=1 Tax=Seculamonas ecuadoriensis RepID=C1K9U6_9EUKA 3.0e-09
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 7.44e-17
Internal
sp_v3.0_unigene81513 SustainPine v3.0 148
AutoFact: Elongation factor 1-alpha (Fragment) n=38 Tax=Microbotryaceae RepID=Q0MX41_9BASI 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 7.132e-31
Putative N-terminus
sp_v3.0_unigene107919 SustainPine v3.0 225
AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene124827 SustainPine v3.0 257
AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Diaphorina citri RepID=Q0PWT7_DIACI 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain