Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 60S ribosomal protein L23a-2 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene26575 SustainPine v3.0 571
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
Complete
sp_v3.0_unigene56568 SustainPine v3.0 226
• AutoFact: RecName: Full=60S ribosomal protein L23a gb|AAK30202.1|AF349961_1 ribosome protein L23a [Daucus carota] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.918e-10
Internal
sp_v3.0_unigene133524 SustainPine v3.0 265
• AutoFact: ribosomal protein L25-like protein [Solanum tuberosum] 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.681e-09
C-terminus
sp_v3.0_unigene150646 SustainPine v3.0 387
• AutoFact: [J] COG0089 Ribosomal protein L23 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene151873 SustainPine v3.0 262
• AutoFact: 60S ribosomal protein L23a n=1 Tax=Daucus carota RepID=RL23A_DAUCA 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.918e-10
Putative C-terminus
sp_v3.0_unigene151893 SustainPine v3.0 438
• AutoFact: ribosomal protein L25-like protein [Solanum tuberosum] 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.279e-09
C-terminus
sp_v3.0_unigene152133 SustainPine v3.0 397
• AutoFact: 60S ribosomal protein L23, putative n=1 Tax=Babesia bovis RepID=A7AME1_BABBO 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 1.919e-10
C-terminus
sp_v3.0_unigene152803 SustainPine v3.0 318
• AutoFact: PREDICTED: ribosomal protein L23a-like [Bos taurus] 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 1.967e-10
C-terminus
sp_v3.0_unigene152946 SustainPine v3.0 147
• AutoFact: 60S ribosomal protein L23a, putative n=2 Tax=Theileria RepID=Q4MZ08_THEPA 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 2.032e-09
C-terminus
sp_v3.0_unigene154952 SustainPine v3.0 543
• AutoFact: 60S ribosomal protein L23a n=1 Tax=Postia placenta Mad-698-R RepID=B8P0K1_POSPM 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.169e-10
N-terminus
sp_v3.0_unigene156381 SustainPine v3.0 345
• AutoFact: 60S ribosomal protein L23a n=7 Tax=core eudicotyledons RepID=RL23A_TOBAC 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene156617 SustainPine v3.0 344
• AutoFact: 60S ribosomal protein n=1 Tax=Aureococcus anophagefferens RepID=F0YN25_9STRA 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene157294 SustainPine v3.0 295
• AutoFact: PREDICTED: similar to ribosomal protein L23Ae isoform 1 n=1 Tax=Tribolium castaneum RepID=UPI0000D570FC 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157830 SustainPine v3.0 332
• AutoFact: ribosomal protein L25-like protein [Solanum tuberosum] 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.195e-10
Putative N-terminus
sp_v3.0_unigene158455 SustainPine v3.0 333
• AutoFact: PREDICTED: similar to ribosomal protein L23a n=1 Tax=Ciona intestinalis RepID=UPI00006A76DE 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene159015 SustainPine v3.0 290
• AutoFact: 60S ribosomal protein n=1 Tax=Aureococcus anophagefferens RepID=F0YN25_9STRA 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.762e-10
C-terminus
sp_v3.0_unigene159138 SustainPine v3.0 333
• AutoFact: Ribosomal protein L23a n=2 Tax=Chlamydomonadales RepID=A8J239_CHLRE 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
Putative C-terminus
sp_v3.0_unigene189946 SustainPine v3.0 154
• AutoFact: PREDICTED: similar to ribosomal protein L23a [Strongylocentrotus purpuratus] ref|XP_792948.2| PREDICTED: similar to ribosomal protein L23a [Strongylocentrotus purpuratus] 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 2.351e-09
C-terminus
sp_v3.0_unigene191756 SustainPine v3.0 354
• AutoFact: 60S rat ribosomal protein L23 n=2 Tax=Sclerotiniaceae RepID=A6SFR7_BOTFB 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.554e-10
C-terminus
sp_v3.0_unigene191958 SustainPine v3.0 472
• AutoFact: PREDICTED: ribosomal protein L23a-like isoform 1 n=3 Tax=Eutheria RepID=UPI0001D56DBB 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 1.992e-10
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain