Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene31566 SustainPine v3.0 488
AutoFact: Chain A, Structure Of A Human Prp31-15.5k-U4 Snrna Complex pdb|2OZB|D Chain D, Structure Of A Human Prp31-15.5k-U4 Snrna Complex 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 3.279e-08
Complete
sp_v3.0_unigene150324 SustainPine v3.0 389
AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 3.279e-08
Putative Complete
sp_v3.0_unigene152032 SustainPine v3.0 378
AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 4.296e-08
N-terminus
sp_v3.0_unigene153269 SustainPine v3.0 286
AutoFact: PREDICTED: similar to hoip-prov protein [Strongylocentrotus purpuratus] ref|XP_001176138.1| PREDICTED: similar to hoip-prov protein [Strongylocentrotus purpuratus] 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 2.9e-08
Putative C-terminus
sp_v3.0_unigene158398 SustainPine v3.0 348
AutoFact: snRNP and snoRNP protein (Snu13), putative [Aspergillus clavatus NRRL 1] gb|EAW13811.1| snRNP and snoRNP protein (Snu13), putative [Aspergillus clavatus NRRL 1] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 2.447e-08
N-terminus
sp_v3.0_unigene162785 SustainPine v3.0 138
AutoFact: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] gb|AAK32786.1|AF361618_1 AT4g12600/T1P17_190 [Arabidopsis thaliana] emb|CAB53753.1| Ribosomal protein L7Ae-like [Arabidopsis thaliana] emb|CAB78303.1| Ribosomal protein L7Ae-lik 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 2.399e-08
Internal
sp_v3.0_unigene166506 SustainPine v3.0 288
AutoFact: 50S ribosomal protein L7Ae n=3 Tax=Pleosporineae RepID=B2WJB2_PYRTR 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 2.399e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain